Gene BamMC406_4517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4517 
Symbol 
ID6179918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1622179 
End bp1622742 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content71% 
IMG OID641684278 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001811189 
Protein GI172063538 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.729154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.542094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA CGCCAGCCGC CTGCGTCATC CGCGATTCGA CCGACGCCGA TCTCGCCGCC 
ATTCACGCGA TCTATGCGCA CCACGTGCGC CACAGCGTCG CGTCGTTCGA GGAGACGCCG
CCCGACGTCG GCGAACTGCG CGGGCGCCGC GACGCGGTGC TGCGTCACGG GCTGCCCTAT
CTCGTCGCGG AATGCGACGG CCACATCGCC GGCTACGCGT ATGCGACGCC GTATCGCACG
CGCAGCGCAT ACCGCCACAC CATCGAGGAC TCGATCTACA TCGACGACGC ACAGCGCGGC
CGCGGCATCG GCCGCGCGCT GCTCGCGACG CTGATCGCGC GGTGCGAGAC CGGCCCGTGG
CGGCAGATGA TCGCAGTGAT CGCCGACGGC GGCACCGGCG GCTCGACGTC GCTGCACCGC
GCATTTGGTT TCGAGCCGGC GGGCGTGCTG AAGGCGGTCG GTTTCAAGCA CGGCCGCTGG
ATCGATACCG CGCTGATGCA GCGCGCGCTC GGCGACGGCG CACGCACGCT CCCCGCCTCG
CCCGAGCCTG TCGCGTCGCG CTAG
 
Protein sequence
MSATPAACVI RDSTDADLAA IHAIYAHHVR HSVASFEETP PDVGELRGRR DAVLRHGLPY 
LVAECDGHIA GYAYATPYRT RSAYRHTIED SIYIDDAQRG RGIGRALLAT LIARCETGPW
RQMIAVIADG GTGGSTSLHR AFGFEPAGVL KAVGFKHGRW IDTALMQRAL GDGARTLPAS
PEPVASR