Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4504 |
Symbol | |
ID | 6180357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1605961 |
End bp | 1607055 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684265 |
Product | TrkA domain-containing protein |
Protein accession | YP_001811176 |
Protein GI | 172063525 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCAACGC CTTCCGCCAA ACGTCGCCCG TTGCGCTCAC GCCTGCGTCG TACCCGTGAT CCGTGGCGGG CGCCGCGCGC ACGCACGCTG TTCACGCGCC CCGCGACGTC ACCGCACCAC ACGCTGCTGT TCCGTCTCGG CGCGGTCGTG GCGCTGTGCA TGCTCGCGTT TCTCGTGCTG TATCTCGATC GCGACGGCCT GCGCGATTCG ACCAAGAGCA CGCCGATGAA CGTCGCCGAT CTCGTGTACT TCACGATGGT CACGGTCGCG ACGGTCGGCT ATGGCGACAT CGTGCCGGTC ACCGCGCGCG CGCGTCTGAT CGATGCGTTC TTCATCGTGC CGATCCGTAT CGGCATCTGG TTCATCTTCC TGGGCACGGC GTATCAGTTC GTGATCCAGC GCGTCATCGA GGAATTCCGC ATGAAACGCC TGCAGAAGCA GCTGTCCGAT CACATCGTCG TGTGCGGCTA CGGCCTGTCG GGGTCGATCG CCGTGCGCGA GCTGCTCGAG AGCGGCGTCG ATCCGTCGAC GATCATCGTG ATCGATGCGC AGCAGCAGGC GCTCGAGGCT GCGACGTCGC TCGGCGTGAC GGGGTTGCTC GGCGATCCCG CGCATGAAGA CCTGCTCCAG CAGGCGCAGG TGCGGGCGGC GAAGGCCGTG ATCATCTCGG TGACCGACGA TCCGACCGCG ATCCTGCTGA CGCTGTCGGT GCGCAGCATC GCGCCCGAGA CGAAGATCGT CGTGCGGATC CAGGAGAACC TGTATCAGCG GCAGTTGCGG CAGGCGGGCG CGGACGTGAT CGTGTCGTCG ACGAAGATCG GCGCGCTGCT GCTCGCCGAT GCGGTGCATA GCCGCTACAT CGTGCCGTTC GTGAACGACA TGTTGTCGAC GCGCGGGCGG GCGACGCTGG TCGAGCGCGA GGCGTTGCCG CACGAGATCG GCTGCATGAC GAACGTCGTG CCGGGCGCGA TCGTCGTCGG GCTCGATCGC TGCGGGAAGA TTCATTCGTT CTACGAGGAT CCGCCGTGCC GGATCGAGAC GGGCGATACG CTGGTCGTGA TTCAGTCGGC CCGGATTCCG GATCCGGATG TGTGA
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Protein sequence | MATPSAKRRP LRSRLRRTRD PWRAPRARTL FTRPATSPHH TLLFRLGAVV ALCMLAFLVL YLDRDGLRDS TKSTPMNVAD LVYFTMVTVA TVGYGDIVPV TARARLIDAF FIVPIRIGIW FIFLGTAYQF VIQRVIEEFR MKRLQKQLSD HIVVCGYGLS GSIAVRELLE SGVDPSTIIV IDAQQQALEA ATSLGVTGLL GDPAHEDLLQ QAQVRAAKAV IISVTDDPTA ILLTLSVRSI APETKIVVRI QENLYQRQLR QAGADVIVSS TKIGALLLAD AVHSRYIVPF VNDMLSTRGR ATLVEREALP HEIGCMTNVV PGAIVVGLDR CGKIHSFYED PPCRIETGDT LVVIQSARIP DPDV
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