| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4503 |
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| Symbol | |
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| ID | 6180253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1604328 |
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| End bp | 1605806 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684264 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001811175 |
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| Protein GI | 172063524 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCCA GGTCGGCGGC TCCCTATACC ATCGTCGTGG TCGGTATCGT GATCGCCTGC
GCGCTGATGG GTCTGTGCGT GCTGCAGCTG TTCCAGAGCC GCAACGACGC GCGGGAGCGG
GCGAGCGAAA CCTCCCGCAA TCTCGGCCTC ATCGCCGAGC GCGACATCGA ACGCAACTTC
GAACTCTACG ACCTTTCGCT GCAGGCGGTC ATCAACGGCC TCAAACGTTC CGACGTGATG
AATGCGTCTC CGAGCCTGCG GCGCTCTGTC CTGTTCGACA ATGCGATGAC GGCGGAATTT
CTCGGCTCGA TGCTGGTACT CGATGCCGGC GGCAACATCG TGCTGGATTC GGCCAACGAC
GTGCCGCGCC GCGGCAATTT CGCCGACCGT AAGTACTTCA CCGTCCATCG TGACAATCCG
AATGCCGGAC TCTTTATCAG CGACCCGTTC ACGTCGCGCC TGCGTGGCGG GGCGCCCAGC
ATCGGGCTCA CGCGGCGAAT CTCGAATCCG GACGGCTCGT TTGGCGGCAT CGTGCTCATT
GCGGTCAACC TCGAGTATTT CCACAATCTG TTTGCCGGCC TGTCACTGGG GCAGCACGGT
TCGATCTCGC TGATCGGCAG CGACGGCGTC ATGGTGATGC GTCAGCCGTA CGACGTCCAT
ACGATCGGCC GAGACATCAG CCACGCCGCG ACCTTCAAGC GGTTTCAGAC CGCGCGGGAA
GGCGTGTTCT CGGAAACCTC GTCGCTCGAC GGAGTGCGCC GGCTCTACTA CTTCAGGCAC
CTGCCGAAGC TGCCGCTGGT GATCATGGTC GCTGAAGCGG AGCAGGACAT TTATGCGGCG
TGGCGGCACC GGGCCGCGAC GATCGGTGGG TTGGTGGCGA CGTTCGGCGC TGCCTTCATC
GCGGTGTCCG TCATGCTCGG CACGCAACTC CGGCGGCGGA TGCGCGCCGA GTCGGAACTC
GTGTTGCTCG CCCGCACCGA CGGTCTCACC GGGTTGAACA ACCGCCGCAG CTTTGGCGAA
GTACTGGATC GCGAATGGCG GCGCGCACGG CGATCGCGAT CGGTATTTTC GTTGTTGTTC
GTCGATGTCG ATCGCTTCAA GGCCTATAAC GACACCTACG GCCATCAGGC GGGAGACGAC
GCACTGGCCG CGGTTGCGCG CTGCATCGGC GAGAACATCC GCCGGCCCGC CGATACCGCG
GCCCGCTACG GCGGGGAGGA ATTCGTCGTG CTGCTCCCCG ATACGCCCGA GACGGGCGCC
GCCCAGATCG CCGAGCGAAT TCGCGCGGCA ATCGACGAAC TGGCGCTCGA GCACGCCGGC
AGCGAACATG GGCATGTGAC CGCCAGTATC GGTCTCGCGA GCTGGACGCC CGACGACGAC
GTGGAGGCCG GCAGCGTGAT CAAGGCCGCC GACGAGGCGC TGTACTACGC GAAGGCGACG
GGCCGCAACA AGGTCGCCGC GTTTCAGCCG CCGGCGTGA
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| Protein sequence | MQSRSAAPYT IVVVGIVIAC ALMGLCVLQL FQSRNDARER ASETSRNLGL IAERDIERNF
ELYDLSLQAV INGLKRSDVM NASPSLRRSV LFDNAMTAEF LGSMLVLDAG GNIVLDSAND
VPRRGNFADR KYFTVHRDNP NAGLFISDPF TSRLRGGAPS IGLTRRISNP DGSFGGIVLI
AVNLEYFHNL FAGLSLGQHG SISLIGSDGV MVMRQPYDVH TIGRDISHAA TFKRFQTARE
GVFSETSSLD GVRRLYYFRH LPKLPLVIMV AEAEQDIYAA WRHRAATIGG LVATFGAAFI
AVSVMLGTQL RRRMRAESEL VLLARTDGLT GLNNRRSFGE VLDREWRRAR RSRSVFSLLF
VDVDRFKAYN DTYGHQAGDD ALAAVARCIG ENIRRPADTA ARYGGEEFVV LLPDTPETGA
AQIAERIRAA IDELALEHAG SEHGHVTASI GLASWTPDDD VEAGSVIKAA DEALYYAKAT
GRNKVAAFQP PA
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