Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4481 |
Symbol | |
ID | 6179395 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1584000 |
End bp | 1584914 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684242 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001811153 |
Protein GI | 172063502 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.765458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCG AGCGTCTCAC GCTGCGCGCG TGGCTTCTCT CCGATGCGCC CGCGTCGCGC TCGCAGGCCG CGTTCGGCCT CGCGTACCGC CGCTGGCGCC GCTTCGCGGG CAATCCGCTC AACCTGTTCG GACTGGCGAT CCTGGTCGCG CTGATCGTCG TCGCGATCGT CGGCCCGCTG ATCATGCCGC ACGATCCGCT GCGCCAGGTG CTGTCCGACC GCCTGCTGCC GCCCGGCTCG GCATCGCACT GGCTCGGCAC CGACCAGCTC GGCCGCGACA TCCTCTCGCG GCTGATCGGC GGCTCGCGCC TCACGCTCGG CATCGCGCTG CTCGTCGTCG TGATCGTCGT GCCGATCGGC CTGATGATCG GCACGACGGC CGGCTATTGC GGCGGCTTCA CCGACAGCGT GCTGATGCGC ATCACCGACA TCGCGCTCGC GTTCCCGAAG ATCGTGCTCG CACTCGCGTT CGCGGCCGCG CTCGGGCCGG GCGTGATCAA CGCGGTCGTC GCGATCTCGA TCACCGCGTG GCCCGCGTAT GCGCGGCTCG CGCGCGCGGA AACGATCCGC ATCGCGCAGG CCGACTACAT CCATGCGGCG CGACTGCAAG GCGCATCGGG CCCGCGGATT CTGCTGCGCT ACATCGTGCC GTTGTGCATG TCTTCGGTGA TCGTGCGCGC GACGCTCGAC ATGGCCGGCA TCATCCTGAC CGTCGCGGGC TTGGGCTTCC TCGGCCTCGG CGCGCAGCCG CCAAGCCCCG AATGGGGATT CATGGTCGCA TCGGGCCGCA ACGTGCTGCT CGACGCGTGG TGGGTCGCGA CGCTGCCCGG CGCGGCGATC CTGCTCGTCA GCCTCGCGTT CAACCTGCTC GGCGACGGGC TGCGCGACGT CTTCGATCCG CGTCATGGAG CGTGA
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Protein sequence | MNAERLTLRA WLLSDAPASR SQAAFGLAYR RWRRFAGNPL NLFGLAILVA LIVVAIVGPL IMPHDPLRQV LSDRLLPPGS ASHWLGTDQL GRDILSRLIG GSRLTLGIAL LVVVIVVPIG LMIGTTAGYC GGFTDSVLMR ITDIALAFPK IVLALAFAAA LGPGVINAVV AISITAWPAY ARLARAETIR IAQADYIHAA RLQGASGPRI LLRYIVPLCM SSVIVRATLD MAGIILTVAG LGFLGLGAQP PSPEWGFMVA SGRNVLLDAW WVATLPGAAI LLVSLAFNLL GDGLRDVFDP RHGA
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