| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4480 |
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| Symbol | |
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| ID | 6180011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1582863 |
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| End bp | 1583933 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684241 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001811152 |
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| Protein GI | 172063501 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.598069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACTC CCGCCTCCTC CCTCGAAGCA CTGCGCACGC TGCCCGCGCG GCGCCCGGCC
GTGCGCTGGG CGCTGCGCGT GCTGCGCTGG GCGCTCACGC TCGCCGTCAC GTTCGCGGGC
CTGCTCGCGC TGACGTTCGT GATCGGCCGC AAGGTGCCGA TCGATCCCGT GCTCGCGATC
CTCGGCGATC GCGCGTCGGC CGAGGCGTAC GCGGCCGAGC GCATCGCGCT CGGCCTCGAC
AAGCCGCTCG TCACGCAATT CCTGATCTAC GCGCGCGACG TGCTGCACGG CAATCTCGGC
ATGTCGCTGC TGACGTCGAA TCCGGTGCTC GACGACATCA GGCGCGTCTT CCCCGCCACG
CTCGAACTCG CGACGATCGC GACCCTGATC GGCATCGCGC TCGGCGTGCC GCTCGGCGTC
GCGGCCGCGG TGCGGCACAA CCGGCCGATC GACCACATCG CGCGCTTCGT CGGCCTGATC
GGCAATTCCG TGCCGGTGTT CTGGCTCGGG CTGATGGGGC TGCTGCTGTT CTATGCGCGG
CTGCACTGGG TAGGCGGCCC CGGCCGGCTC GATCCCGTGT ACGACGGCAT GGTCGACCCG
CGCACCGGCA GCCTGCTGCT CGACTCGGCG CTCGCGGGCG AGTGGGACGT GTTCCGCAAC
GCGGTGTCGC ACATCGCGCT GCCGGCCGCG ATCCTCGGCT ACTACTCGGT TGCGTACCTG
AGCCGGATGA CGCGCTCGTT CATGCTCGAC CAGCTGAGCC AGGAATACAT CGTCACCGCG
CGCGCGAAGG GCCTGTCCGA GCGCCGCGTG ATCTGGCGGC ATGCGTTCGG CAACATCGCG
GTGCCGCTGC TCACCGTGAT CGCGCTCACA TACAGCAACC TGCTCGAAGG CTCGGTGCTG
ACCGAGATCG TGTTCGCGTG GCCGGGGCTC GGCTCGTACC TGACGGGCGC GCTGCTGAAC
GCCGACATGA ACGCGGTGCT CGGCGCGACG CTCGTGATCG GCGTGATGTT CATCACCGTC
AACCTGCTGA CCGACGCGCT GTACCGCGTG TTCGATCCGC GTGCGCGCTG A
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| Protein sequence | MSTPASSLEA LRTLPARRPA VRWALRVLRW ALTLAVTFAG LLALTFVIGR KVPIDPVLAI
LGDRASAEAY AAERIALGLD KPLVTQFLIY ARDVLHGNLG MSLLTSNPVL DDIRRVFPAT
LELATIATLI GIALGVPLGV AAAVRHNRPI DHIARFVGLI GNSVPVFWLG LMGLLLFYAR
LHWVGGPGRL DPVYDGMVDP RTGSLLLDSA LAGEWDVFRN AVSHIALPAA ILGYYSVAYL
SRMTRSFMLD QLSQEYIVTA RAKGLSERRV IWRHAFGNIA VPLLTVIALT YSNLLEGSVL
TEIVFAWPGL GSYLTGALLN ADMNAVLGAT LVIGVMFITV NLLTDALYRV FDPRAR
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