| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4479 |
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| Symbol | |
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| ID | 6180010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1581251 |
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| End bp | 1582852 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684240 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001811151 |
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| Protein GI | 172063500 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.027731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.668994 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCC CGACCTCCCG GCTCGTCGCG GCACTGGCCG CCGCGTCCGT TCTCGCCACC
GTTCCGCTTC GCGCCGCGCA CGCGGAAACG CCGAAGGACA TGTTCGTGAT GGCCACGCTG
CTCGACGAAT TCACGACGCT CGATCCCGGC GAGATCTACG AACTGGTGCC GGAGGAATAC
GTCGCGAACA CCTACGACCG GCTCGTGCGC GTCGACTTGC GCGATCCGTC GAAATTCAAC
GGCGATGTCG CGCAGTCGTG GACGGTGAGC CCCGACGGGC TGACCTACAC GTTCAAGCTG
CGCTCGGGCC TCAAGTTCCA TTCGGGCAAC CCGCTGACGG CCGACGACGT CGCGTGGTCG
ATCCAGCGCG CGGTGCTGCT CGACAAAGGC CCGGCCGCCG TGCTGACGGG CATCGGCCTC
ACGAAGGCGA ACGTCGCGGC GAACGTGAAG AAGCTCGACG ACCAGACGGT ATCGATCACG
ACCGACCACA AATACGCGCC CACCTTCGTG CTGAACGTGC TCGGCTCGTG GCCCGCGTCG
GTGGTCGACA GGAAGCTGCT GCTGTCGCAC CAGCAGGGCA ACGACTTCGG CAACGCATGG
CTGAAGACCA ACGAGGCCGG CTCCGGCGCC TACAAGCTGG TCAAGTGGAG CGCCGGCGAC
AGCATCGTGC TGCAGCGCTT CGACGGCTAC CGGCTGCCGC TCGCGATGAA GCGCATCGTG
CTGCGCCATG TGCCCGAAGC GGCGAGCCAG CGCCTGCTGC TGGAAAACGG CGACGTCGAC
GCGGCGCGCG ACCTGAGCCC CGACGATCTC GCGGCGGTCG TGAAATCCGG CAAGGCGAAG
GTCGCGGCAT CGCCACAAGC GACGCTGCTG TATCTCGGCC TGAACACGAA GAACCCGACG
CTCGCGAAGC CCGACGTACA GGAAGCGCTG AAGTGGCTGG TCGACTATTC CGGCATCCAG
GCCAACGTCG TGAAGACGAC CTACAAGGTG CACCAGACCT TCCTGCCCGA AGGCTTCCTC
GGCACGCTGA AGGCGAACCC GTACAAGCTC GACGTCGCGA AGGCGAAGGC GCTGCTCGCG
AAGGCCGGCG TGCCGAACGG CTTCTCCGTG ACGATGGACG TGCGCAACGA CTATCCGTAC
ACGGAGATCG CGCAGGCCGT GCAGGCGAAC TTCGCGCAGG CGGGCGTCAA GGTGCAGCTG
ATTCCCGGCG ACAACAAGCA GACGCTCGCG AAATACCGCG CGCGCCAGCA CGACATCTAC
ATCGGCGAAT GGTCGGCCGA CTACATCGAT CCGCACAGCA ACGCGCAGGG TTTTGCGTGG
AACCCCGACA ACTCCGACAA GTCGAGCTAT AAAATGCTCG CCTGGCGCAA CAGCTGGGAC
ATTCCGCAAT TCACGAAGGA GACCGACGCC GCCCTCGCCG AGCCGACCGC CGCGCAACGC
GCGCAACGGT ATCAGGCGAT GCAGAAGGAG ATGCTCGCGC GCTCGCCGTT CGTGATCATG
TTCGAGAAAG TCGCGCAGGT CGCGACGCGG CCCGGCGTGA GCGGGCTCGA AGTCGGACCG
ATCAACGATC TCGTGTCGTA CCGTAACCTG AAGAAGCCTT AA
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| Protein sequence | MKLPTSRLVA ALAAASVLAT VPLRAAHAET PKDMFVMATL LDEFTTLDPG EIYELVPEEY
VANTYDRLVR VDLRDPSKFN GDVAQSWTVS PDGLTYTFKL RSGLKFHSGN PLTADDVAWS
IQRAVLLDKG PAAVLTGIGL TKANVAANVK KLDDQTVSIT TDHKYAPTFV LNVLGSWPAS
VVDRKLLLSH QQGNDFGNAW LKTNEAGSGA YKLVKWSAGD SIVLQRFDGY RLPLAMKRIV
LRHVPEAASQ RLLLENGDVD AARDLSPDDL AAVVKSGKAK VAASPQATLL YLGLNTKNPT
LAKPDVQEAL KWLVDYSGIQ ANVVKTTYKV HQTFLPEGFL GTLKANPYKL DVAKAKALLA
KAGVPNGFSV TMDVRNDYPY TEIAQAVQAN FAQAGVKVQL IPGDNKQTLA KYRARQHDIY
IGEWSADYID PHSNAQGFAW NPDNSDKSSY KMLAWRNSWD IPQFTKETDA ALAEPTAAQR
AQRYQAMQKE MLARSPFVIM FEKVAQVATR PGVSGLEVGP INDLVSYRNL KKP
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