| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4474 |
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| Symbol | |
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| ID | 6179710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1574777 |
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| End bp | 1576366 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684235 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001811146 |
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| Protein GI | 172063495 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0385001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.989495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATC TGCTGTCCCG GCTGTTCGTC AGCGCCGCGC TCGTCGCGCT TGTTCCGGCG
TTGCCGGCGC AGGCCGCGAC GCCGCCCGGC ATCTTCGTCG TCGCCACCCA GCTCGGCGAA
TTCACGACCC TCGACCCGAG CGAAATCTAC GAGCTCGTGC CGTCCGAGTA CGTCGCGAAC
ACCTATGAAC GGCTCGTGCG GGTCGACCTG AAGGACCCGA CGCGCTTCGA CGGGCAGATC
GCACAATCGT GGACGGTCGG CGCCGACGGC GTCACCTACA CGTTCAAGCT GCGCCCCGGC
CTCACGTTCC ATTCCGGCAA CCCGGTCACC GCCGACGACG TCGCATGGTC GCTGCAGCGC
ACCATCCAGC TCGACAAGGG CCCGGCCGGC GTGCTCGCCG ATCTCGGTCT CACGAAGGCG
AACGTGATGC AGAAGGTGCG CGCGATCGAT CCGCAGACCT TCGTGCTCGA AACCGACCGC
AAGTACGCGC CGAGCTTCGT GCTCAACGTG CTGAGCGCGT GCCCGGCGTC GGTGCTCGAC
AAGAAGCTGC TGATGTCGCA CCAGCAGGGC AACGATTTCG GCAGCGGCTG GCTGAAGACC
AACGACGCGG GCTCGGGCCC GTACCAGCTC GTCAAGTGGT CGCCGAACGA GAGCATCGTG
CTGCAGCGTT TCGACAAGTA CCGCGCGCCG TACCCGATGA AACGCGTCGT GCTGCGCCAC
GTGCCCGAGG CGTCCGCGCA GCGGCTGCTG CTCGAGAACG GCGACGTCGA CGCCGCGCGC
AACCTGAGCC CCGACAGCCT TGCCGCGCTG ACCAAGGCCG GCAAGATCAA GGTCGCGTCG
TGGCCCGTGT CCGCGCTGCT GTACCTGAGC CTGAACACGA AGAACGCGAA TCTCGCGAAG
CCGGACGTGC AGCAGGCGAT GAAGTGGCTC GTCGACTACG ACGGCATCCA GCGCAACATC
GTCAGCACGA CCTACAAGGT GCACGAGACC TTCCTGCCCG AAGGTTTCCT CGGCACGCTG
AATTCGAACC CGTACAAGCT CGACGTCGCG AAGGCGAAGG CGCTGCTCGC GAAGGCCGGC
TTGCCGAACG GCTTCGACGT GACGATGGAC ATGCCGAACG ATTATCCGTA CATCGAGATC
GCGCAGGCGC TGCAGGCGAA CTTCGCTCAG GCCGGCATCC GCGTGAAGCT GATCCCGGGC
GATGCGAAGC AGGCGATCGG CAAGTACCGC GCGCGCCAGC ACGACATCTT CATCGGCGAA
TGGTCGCCCG ACTACATGGA CCCGAACAGC AACGCGCGCG GGTTCGCATG GAATCCTGAC
AATTCCGACC AGTCCAAGAC GAAGATGCTC GCATGGCGCA ACAGCTGGGA CATCCCGCAG
CTGACGAAGG ATACCGAGGC CGCGCTCGTC GAGCCGTCGT CCGCGAAGCG CGCGCAGCGC
TACGAGGCGC TGCAGAAGTC CGTACTCGCG AACTCGCCGT TCATCATCAT GTTCGAGAAG
GTCGTGCAGG TCGCCACGCG CCCCGGCACG ACCGGGCCGG AGATCGGGCC GATCAACGAT
CTGGTGTCCT ACCGGACGTT GAAAAAATAG
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| Protein sequence | MKHLLSRLFV SAALVALVPA LPAQAATPPG IFVVATQLGE FTTLDPSEIY ELVPSEYVAN
TYERLVRVDL KDPTRFDGQI AQSWTVGADG VTYTFKLRPG LTFHSGNPVT ADDVAWSLQR
TIQLDKGPAG VLADLGLTKA NVMQKVRAID PQTFVLETDR KYAPSFVLNV LSACPASVLD
KKLLMSHQQG NDFGSGWLKT NDAGSGPYQL VKWSPNESIV LQRFDKYRAP YPMKRVVLRH
VPEASAQRLL LENGDVDAAR NLSPDSLAAL TKAGKIKVAS WPVSALLYLS LNTKNANLAK
PDVQQAMKWL VDYDGIQRNI VSTTYKVHET FLPEGFLGTL NSNPYKLDVA KAKALLAKAG
LPNGFDVTMD MPNDYPYIEI AQALQANFAQ AGIRVKLIPG DAKQAIGKYR ARQHDIFIGE
WSPDYMDPNS NARGFAWNPD NSDQSKTKML AWRNSWDIPQ LTKDTEAALV EPSSAKRAQR
YEALQKSVLA NSPFIIMFEK VVQVATRPGT TGPEIGPIND LVSYRTLKK
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