| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4472 |
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| Symbol | |
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| ID | 6179708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1572198 |
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| End bp | 1573757 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684233 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001811144 |
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| Protein GI | 172063493 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.238318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.949404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCTT CCTCCCCACC CGGCCCGCTG ACGGGCGCCC GGCTCGCGAT CGGCACGATC
GCGGTATCGC TCGCGATGTT CATGAACGTG CTCGACTCGT CGATCGCGAA CGTCGCGATC
CCGACGATCT CGGGGGAGCT CGGCGTGTCG GTCGACGAAG GCACGTGGGT GATCACGATC
TTCGCGGCCG CAAACGCCGT GTCGATTCCA TTGACGGGCT GGCTCACGCA GCGCTTCGGC
CAGGTGCGCC TGTTCGTCAC GTCGATCCTG CTGTTCGTGT TCGCGTCGTG GCTGTGCGGG
ATCGCGCCGA ACCTGCCGAC GCTGCTCGCC GCACGCATCC TGCAGGGTGC AGTCGCCGGG
CCGCTCGCGC CGTTGTCGCA GGCGCTGCTG CTCGGCGCAT GGCCGCGGCA GAAATCGGCG
ACGGCGCTCG CGCTGTGGTC GATGACCGCG CTCGTCGGCC CGATCGCGGG GCCGTCGCTC
GGCGGCTGGA TCACCTACGA CTACAACTGG TCGTGGATCT TCTACATCAA CATTCCGGTC
GGTTTCTTCG CGGCGGCGGT CACGTGGTTC GTGTTCCGCG ATCGCGAATC GCCGGTGCGT
CGCCTGCCGA TCGACACGGT CGGCCTCCTG CTGCTCGTGC TGTGGGTCGC GTCGCTGCAG
ATCATGCTCG ACAAGGGCAA GGATCTCGAC TGGTTCAATT CGCCCGTCAT CGTCGCACTC
GGTATCGTCG CGCTGGTCGG CTTCGCGTTC TTTCTCGTGT GGGAGCTGAC CGAGGCCAAT
CCGATCGTCG ACCTGCGGCT TTTCACGCAG CGCAATTTCG CGGGCGGCAC GATCGCGATC
TCGGTCGCGT ACGGGATGTT CTTCGGCACG CTGGTGCTGC TGCCGCAGTG GATGCAGGGC
TATCTCGGCT ATCGCGCGAT CGACTCGGGG CTCGCCACCG CGCCGCTCGG GATCTTCGCG
ATCCTGCTGA CGCCGGTGAT GGGACGCATC CTGCCGCGCA CCGATCCGCG CTACCTCGCG
ACGCTCGCCT TCGTCGGCTT CGCGGTCGTG TTCATGATGC GCACGACGTT CTATTCCGAC
GTGTCGCACT GGGATCTCGT GCTGCCGACG CTGCTGCAGG GCATTCCGAT GGCGATGTTC
TTCGTGCCGC TCACTGCCAT CATCCTGTCG GGGCTGCCGC CGGAGAAGAT TCCCGCGGCC
GCCGGCCTGT CGAATTTCGG CCGCACCTTC TGCGGCGCGG TCGGCACGTC GCTGATCAGC
AATGCGTGGA ACGACCGGAC GATCCTGCAT CACGTGCGGC TCACCGAACA GGCGAGCCCG
GGCAACCCGA TCTTCACCCA GCAGCTCGAC GGCGCGCGTT CGCTGCTGCA CCTGAGCCCC
GATTCGGCGC TCGCGTTCTT CAACACGTCG GTCGATTCGC AGGCGGCCGT GATGGGGCTG
AACGACATCT TCTACGTGTC GGCGATCATC TTCATCGCGA TCATTCCGCT GATCTGGATC
ACCCGGCCGT CGCGCTCGGG CGGCGACGAT GCGGGCGCGG CGGCGGCGGG TGCGCATTGA
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| Protein sequence | MSSSSPPGPL TGARLAIGTI AVSLAMFMNV LDSSIANVAI PTISGELGVS VDEGTWVITI
FAAANAVSIP LTGWLTQRFG QVRLFVTSIL LFVFASWLCG IAPNLPTLLA ARILQGAVAG
PLAPLSQALL LGAWPRQKSA TALALWSMTA LVGPIAGPSL GGWITYDYNW SWIFYINIPV
GFFAAAVTWF VFRDRESPVR RLPIDTVGLL LLVLWVASLQ IMLDKGKDLD WFNSPVIVAL
GIVALVGFAF FLVWELTEAN PIVDLRLFTQ RNFAGGTIAI SVAYGMFFGT LVLLPQWMQG
YLGYRAIDSG LATAPLGIFA ILLTPVMGRI LPRTDPRYLA TLAFVGFAVV FMMRTTFYSD
VSHWDLVLPT LLQGIPMAMF FVPLTAIILS GLPPEKIPAA AGLSNFGRTF CGAVGTSLIS
NAWNDRTILH HVRLTEQASP GNPIFTQQLD GARSLLHLSP DSALAFFNTS VDSQAAVMGL
NDIFYVSAII FIAIIPLIWI TRPSRSGGDD AGAAAAGAH
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