| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4466 |
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| Symbol | |
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| ID | 6179221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1562548 |
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| End bp | 1563789 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684227 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001811138 |
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| Protein GI | 172063487 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.240945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGA ACGAATCCTG GTTTGCGCCG CTCGTCGGCC TCCTCATCCT GCTCGCCGCC
GCCGGCGCGA TCACCGCCGC CGTCCATTTC CTGCTGTTTC GCGTGGTCGC GCGCCTCGCG
CGGCTGTCGG CCACGCGCAT CGACGACGCG CTGTTCGAGT TCGGCGCATT CAAGTGGCTG
AACCGCATCG TGCCGTTCGT CGTGATCAAG CTCGGGCTCG CGGCCGTGCC CGGGATCCCG
GCCGCGGCCG CGCAGGCCGC CGACAAGGTG CTGTTCGCGC TGATCGTGTT GCTGGTGTCG
ATGACGATCA GCGCGACGCT GTCCGCGCTC GAACACACGC ATCGCATGAG CCATCGCGAC
CAGCCGCGCC TGTCGCTGAA AGGCGCAATG CAGCTCGTCA AGCTCGTGAT GTTCATCACG
GCCGCGCTCG TCGTGATCGG CGACGCGACC GGCAAGCAGA TCGGCCTGCT GCTGTCGGGC
ATCGGCGCGA TGTCGGCAGT GCTGATGCTG ATCTTCAAGG ACACGCTGCT CGGCCTCGTC
GCCGGCGTGC AGTTGTCGTC GAACGACATG CTGCGGATCG GCGACTGGAT CACGATGCCG
TCGGCCGGCG CGGACGGCAC CGTGATCGAC ATCACGCTGA ACACGGTGAA GGTCGCGAAC
TTCGATCACA CGATCATCAC GGTGCCGACA TGGAAGCTGA TCACCGAGAG CTACCAGAAC
TGGCGCGGGA TGACCGAAGC CGGCGGGCGC CGCATCAAGC GCGCGCTGTT CATCGACGCG
ACGAGCGTCC GCTTTCTCGA CAACGACGAG ATCGCACGGC TCGAACGCCT GACGCTGCTG
AAGGACTACC TGGAAGACAA GGTCGACGCG ATCGCGCAAT GGAACGGCAC GCTCGGCACG
GCGGGTGAAT GCCCGGCGAA CCGCCGCCAG CTGACGAATC TCGGCACGTT CCGCGCGTAC
GTCGCGAACT ACCTGAAGGG TCATCCGCGA ATCCGCCGCG ACATGACGTG CATGGCGCGC
CAGTTGCCGC TCACGGCCGA AGGCATTCCG CTCGAACTGT ACTGCTTCAC CGACACGACG
AGCTGGGTCG ACTACGAGAC GATCCAGGCC GACCTGTTCG ATCACATGAT CGCGGTGCTG
CCGGAGTTCG GGCTGCGCGT GTACCAGCAC CCGTCAGGCT TCGACATGCG CCGGATGGCC
GGCGCGGCGC AAGGCGAACT GCAGGCGCCG CACGCGCTGT AA
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| Protein sequence | MTLNESWFAP LVGLLILLAA AGAITAAVHF LLFRVVARLA RLSATRIDDA LFEFGAFKWL
NRIVPFVVIK LGLAAVPGIP AAAAQAADKV LFALIVLLVS MTISATLSAL EHTHRMSHRD
QPRLSLKGAM QLVKLVMFIT AALVVIGDAT GKQIGLLLSG IGAMSAVLML IFKDTLLGLV
AGVQLSSNDM LRIGDWITMP SAGADGTVID ITLNTVKVAN FDHTIITVPT WKLITESYQN
WRGMTEAGGR RIKRALFIDA TSVRFLDNDE IARLERLTLL KDYLEDKVDA IAQWNGTLGT
AGECPANRRQ LTNLGTFRAY VANYLKGHPR IRRDMTCMAR QLPLTAEGIP LELYCFTDTT
SWVDYETIQA DLFDHMIAVL PEFGLRVYQH PSGFDMRRMA GAAQGELQAP HAL
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