Gene BamMC406_4464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4464 
Symbol 
ID6179219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1560187 
End bp1560750 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content68% 
IMG OID641684225 
Productisochorismatase hydrolase 
Protein accessionYP_001811136 
Protein GI172063485 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0939811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA CCCGTCTCGA CACGAACACG GCGCTCGTCG TCATCGACCT GCAAAAAGGC 
ATCGTCGCGC TGCCCACGTC CCACCCGGTC GCCCCGGTGA TCGAGCGCAC GCGCGAACTG
CTCGACGCAT TCCGCGAGCG CGGGCTGCCG GTCGTACTCG TCAACGTCGC CGGCGGCGCG
CCGGGCCGCA CGCAGCAGCA GGCGCGTCGT GATGCCCTTC CTGCCGACTG GACCGACCTC
GTACCCGAAC TGAACCGCCA GCCGGGCGAC CACGTCGTGA CGAAGAAGAC CTGGGGTGCA
TTCACCGCCA CCGATCTCGA CGCGTACCTG AAAGCAGCCG GCGTCACGCA GATCGTGCTG
ACCGGTGTCG CGACCAGCAT CGGCGTCGAA TCGACGGCAC GCCAGGCGCA CGAGCTCGGC
TACAACGTGA CGCTGGCGGT CGACGCAATG ACTGACCTCA GCGCGGACGC GCACACGAAC
AGCGTCGAAC GGGTGTTCCC GCGTCTCGGC GAGACGGGTT CGACGCAAGA AATTCTCGCG
CTGCTCGACC GGCGCGGCGC ATGA
 
Protein sequence
MSTTRLDTNT ALVVIDLQKG IVALPTSHPV APVIERTREL LDAFRERGLP VVLVNVAGGA 
PGRTQQQARR DALPADWTDL VPELNRQPGD HVVTKKTWGA FTATDLDAYL KAAGVTQIVL
TGVATSIGVE STARQAHELG YNVTLAVDAM TDLSADAHTN SVERVFPRLG ETGSTQEILA
LLDRRGA