Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4464 |
Symbol | |
ID | 6179219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1560187 |
End bp | 1560750 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684225 |
Product | isochorismatase hydrolase |
Protein accession | YP_001811136 |
Protein GI | 172063485 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0939811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAA CCCGTCTCGA CACGAACACG GCGCTCGTCG TCATCGACCT GCAAAAAGGC ATCGTCGCGC TGCCCACGTC CCACCCGGTC GCCCCGGTGA TCGAGCGCAC GCGCGAACTG CTCGACGCAT TCCGCGAGCG CGGGCTGCCG GTCGTACTCG TCAACGTCGC CGGCGGCGCG CCGGGCCGCA CGCAGCAGCA GGCGCGTCGT GATGCCCTTC CTGCCGACTG GACCGACCTC GTACCCGAAC TGAACCGCCA GCCGGGCGAC CACGTCGTGA CGAAGAAGAC CTGGGGTGCA TTCACCGCCA CCGATCTCGA CGCGTACCTG AAAGCAGCCG GCGTCACGCA GATCGTGCTG ACCGGTGTCG CGACCAGCAT CGGCGTCGAA TCGACGGCAC GCCAGGCGCA CGAGCTCGGC TACAACGTGA CGCTGGCGGT CGACGCAATG ACTGACCTCA GCGCGGACGC GCACACGAAC AGCGTCGAAC GGGTGTTCCC GCGTCTCGGC GAGACGGGTT CGACGCAAGA AATTCTCGCG CTGCTCGACC GGCGCGGCGC ATGA
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Protein sequence | MSTTRLDTNT ALVVIDLQKG IVALPTSHPV APVIERTREL LDAFRERGLP VVLVNVAGGA PGRTQQQARR DALPADWTDL VPELNRQPGD HVVTKKTWGA FTATDLDAYL KAAGVTQIVL TGVATSIGVE STARQAHELG YNVTLAVDAM TDLSADAHTN SVERVFPRLG ETGSTQEILA LLDRRGA
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