| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4454 |
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| Symbol | |
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| ID | 6181185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1548047 |
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| End bp | 1548889 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684215 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001811126 |
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| Protein GI | 172063475 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.160323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCTC GTTTCCCGCT TCGACATTTC CTCCGCGGCG CGCTCGTGCC GCTCGCGTTC
GCGTGCTCGC TCGCGGCCGC TGCTCCGCTG CAGACGGTGC GGCCCGGCAC CTTGCTGGTG
GGCTCCGACC TCACGTATCC GCCTTACGCG TACCTGGAAG CCGGCAAGCC CGCCGGCTTC
GACGCCGAGT TCGCGCGGCT GCTCGCGCGT CACCTGAAGC TGGAGCCGGT GTTCCTCGAT
ACGCGGTTTC CGGACCTGAT CCTCGGCATG AAGGCGCGCC GCTTCGACGT CGTCGCGTCC
GCGCTGTACG TGACGCCCGA TCGCGTGAAG CAGGTCGATT TCGTGCCGTA CCTGAAGACG
GGCGCATCGC TGCTCGTCGC GAAGGGCAGC GCGTTCCAGC CGAAGACGCC GCAGGACCTG
TGCGGCAAGC GGGTCGGCTC GATCAAGGGG GCGTCGTGGA CGCCGAAGCT GCGTGCGGTG
TCGCAGGACA CGTGCAAGGC GGCCGGGCGC GGCGAGATCG CGATCCTCGA GTTCCCGACG
TCGCCGGAAG CGACGTCGGC GCTGATGTCG AAGGCGGTCG ATGTCCAGAT CGAGGACGCG
GCTGTCGCGC AGGGGATTCC GAAACAGACG AACGGGCGTG TCGACATCAG TTCGACGACG
CTGTTGTATC CGATCGTCAT CGGCCTCGGC ATGACGAAGG GCGATAGCGG CCTGCAGGGT
GCGCTACAGG GCGCATTGAA CGATGCGAAG CGCAGCGGCG AGTACGGCAG CCTCGTGAAG
AAATACGGAT TGCAGGAGCC GACGCCCGCC GACGTCGCCA ATGCGCTCGG CACCGAGAAG
TAG
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| Protein sequence | MSARFPLRHF LRGALVPLAF ACSLAAAAPL QTVRPGTLLV GSDLTYPPYA YLEAGKPAGF
DAEFARLLAR HLKLEPVFLD TRFPDLILGM KARRFDVVAS ALYVTPDRVK QVDFVPYLKT
GASLLVAKGS AFQPKTPQDL CGKRVGSIKG ASWTPKLRAV SQDTCKAAGR GEIAILEFPT
SPEATSALMS KAVDVQIEDA AVAQGIPKQT NGRVDISSTT LLYPIVIGLG MTKGDSGLQG
ALQGALNDAK RSGEYGSLVK KYGLQEPTPA DVANALGTEK
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