| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4447 |
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| Symbol | |
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| ID | 6180768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1540522 |
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| End bp | 1541769 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684208 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001811119 |
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| Protein GI | 172063468 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.362184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTCT CGCTCACTCC CGCGCGCGAA TCGAACTCGC CGCGCTTCCT GTTGTTTCTG
ATTTGCCTGT TCTCGTCCGC CGGCCAGCTC GCGATCGACA TCTACGTGTC CGCGCTGCCC
GACATGGCGC GCTCGTTCGC GACCACGCCG CAGGCGATCC AGTCGAGCGT GTCCGGCTAC
ATGGCCGCCT ATGCGCTCGG CCAGCTGATC TTCGGCCCGG TCGCCGATGC GTACGGACGC
AAGCGCGTGC TCGCGTTCGG GCTCGTCATC TACACGATCG GCTGCCTGCT GTCGCTCGGC
GCGCCGAACC TGGAGACGTT CATACTGGCG CGCTGCCTGC AAGGCTTCGG GATCGCGACC
ACCAACCTGC TTGCGAAGGC GATCATCACC GATTCGTTCT CGGGCCAGGC GCTGATGCAT
GCGTTCACCT ACATGTCGAT CGCGTGGGGG CTCGCGCCGA TCATCGCGCC GGTGATCGGC
GCGCACCTGC AGGAATGGTT CGGCTGGCGC GCGTGCCTCG TGTTCCTGCT GGTGTATTCG
CTGGTGATGT GGGCGCTGTG GTGGCATTAC CGGGAAACCT TGCCGAAACC GGTCCATCTC
GAGCCGCGTA CGCTGATCGC GAACGCCGGC AAGGTGCTCG GGAGCCCGGT GTTCCAGAGC
TGCTTCCTCG CGCAGGGGCT GTGCTACAGC ATCCTGCTGG TGTTCAACAT CGTCGGGCCG
TTCATGGTGC AGACCACGCT GCACAAGCCG CCGACCTTCT TCGGCTATCT CGCGCTCGGC
ATCGGGCTGA TGTATTTCCT CGGCGGGCTG TCGAACCGGA TCCACGGACG CGGGTTGCCG
AGCGCGGAGC AGCGGCTGCG CATCGGCGCG CGCGTGATGG CGGTCGCGGC GGTCGTGATG
CTCGCGCTGG CGCTGACCGT CGGCCTGCGC GTGTGGACCC TCGCGACGCC GGTGCTCGTG
ATGGGCCTCT GCGCGGGTGC GATGTATCCG ACGCTGATGG CGAAGGGCAA TTCGCTGTTT
CCGCATATCG CGGGGCTGAC GAGCGCGATT CTCGGGTGCG CGCTGCTGCT CGTGTCGTCC
GCGATGATGG GGCTGGCCGG CTTCGTGTCG GTGCAGGTGC TGACGCCGCT CGCGGTGTTC
TTCGTCGCGC TGTCGTTCAT CGTCGTGTGG ATGGTGACGA AGCTGCTGCG CTACCTGAGC
CAGCAGCAGG CCGCGAACGT CGCTTGCGGA AGCGGGGAGG CGGCGTAA
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| Protein sequence | MNVSLTPARE SNSPRFLLFL ICLFSSAGQL AIDIYVSALP DMARSFATTP QAIQSSVSGY
MAAYALGQLI FGPVADAYGR KRVLAFGLVI YTIGCLLSLG APNLETFILA RCLQGFGIAT
TNLLAKAIIT DSFSGQALMH AFTYMSIAWG LAPIIAPVIG AHLQEWFGWR ACLVFLLVYS
LVMWALWWHY RETLPKPVHL EPRTLIANAG KVLGSPVFQS CFLAQGLCYS ILLVFNIVGP
FMVQTTLHKP PTFFGYLALG IGLMYFLGGL SNRIHGRGLP SAEQRLRIGA RVMAVAAVVM
LALALTVGLR VWTLATPVLV MGLCAGAMYP TLMAKGNSLF PHIAGLTSAI LGCALLLVSS
AMMGLAGFVS VQVLTPLAVF FVALSFIVVW MVTKLLRYLS QQQAANVACG SGEAA
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