Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4426 |
Symbol | |
ID | 6181533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1511548 |
End bp | 1512516 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684187 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811098 |
Protein GI | 172063447 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.715776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGC TCGAAAACAT GCGCCTGTTC GTGCGCGTTG TCGAAGCCGG CAGTTTCACC GCGGTCGCGA AAGAAATCGA CGCGACCACC GCGCAGGTGT CGCGCGCGGT TTCGAATCTC GAAGCCCACG TGCAGACACG CCTGCTGCAT CGCACGACGC GCCATCTCGG TCTCACCGAA AGCGGCGAGC GCTATTTCGA GCGGGCGAAA TCGATCCTCG CCGAAATCGA CTACGCGAAC GCCGAAGCGC GCAACGCGCT GCTGCGGCCG AGCGGCAAGA TGCGCATCCA TGCGATGACG GGGCTCGGGC AGAGTCATGT CGTGTCGTCG ATCGTGCGCT ATCAGGAAGA CAACCCGGAC GTGTCGGTCG AGCTGACGCT CGCGCAGCGG ATGCCGAACC TCGTCGAGGA GGGCTACGAC GTGTCGATCG TGACCGCGTC GCAGTTGCCC GATTCCGGCT ACGTCGCGCA GACCTGCGGC ACGAGCTGCA GCGTGCTGGT CGCATCGCGC GACTACCTCG CGCGGCACGG CACGCCGAAG ACGCCGGACG ACCTGCCGAA CCATGTGTGC CTGCGCCTCG ATACGCCCGC GTCGCCGGCC AGCGAGTGGC GGCTCGAGCG CGGCGACGAC GAGGAGACCG TCTACGAACT GCAGCCGGCG CCGTTCCAGG TCAACGTGCC GGATGCGCTG TGCGTCGCGG TGCGGGCGGG GCGCGGCATC GCGTGCGTCG CGCTGTACAC GGTGCTCGAC GACCTTCGCG AAGGGCGGCT GATCCGCGTG CTGCCCGAGT ACCGCCTGCA GACGGTCAGC GTGTACGCCG TCTATGCGAC GCGCCGCTAT CTGGACGCGA AGATCCGCAC CTTCCTCGAC CATCTGCGCA CGACGCTCAC GCCCGCGCTG GAGAACGACC TGCGCGAACT CGACCGGCTC ACGGTCGAGC ACACGCCGGG CAAGCGCCAG CGCGCGTGA
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Protein sequence | MDMLENMRLF VRVVEAGSFT AVAKEIDATT AQVSRAVSNL EAHVQTRLLH RTTRHLGLTE SGERYFERAK SILAEIDYAN AEARNALLRP SGKMRIHAMT GLGQSHVVSS IVRYQEDNPD VSVELTLAQR MPNLVEEGYD VSIVTASQLP DSGYVAQTCG TSCSVLVASR DYLARHGTPK TPDDLPNHVC LRLDTPASPA SEWRLERGDD EETVYELQPA PFQVNVPDAL CVAVRAGRGI ACVALYTVLD DLREGRLIRV LPEYRLQTVS VYAVYATRRY LDAKIRTFLD HLRTTLTPAL ENDLRELDRL TVEHTPGKRQ RA
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