| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4423 |
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| Symbol | |
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| ID | 6181139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1507057 |
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| End bp | 1508610 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641684184 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_001811095 |
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| Protein GI | 172063444 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.961003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGTT CTTCTGCACA TTCGGTGAAT TCGGGCGCGC TGGCGCCGTC GGCGGTCGTC
GGCGTGATCG GCGCGGGCGC GATGGGCGCG GGCATCGCGC AGGTCGCGGC GGCCGCCGGT
CATACCGTGC TGCTGTACGA CCTGAACGAG GCGGCATGCG ACAAGGCGCT CGCCGGCATC
CGCGCGCAGT TCGCGCGGCT CGCGGAGAAG GGGCGGATGG AGCCGGCGCA GGCCGACGCG
GCCGGCAACC GGATTCGCGC GGTGCGCGCG CTGGCCGAGT TCGCCGGCGC CAGGCTGATC
GTCGAGGCGG CGGCCGAGCG TCTCGACGTG AAGCGCGAGA TCTTCGCGAC GCTCGAACGC
CATGTCGACG AGACCTGCGT GCTGGCGACC AACACGTCGT CGATCTCGAT CACGTCGATC
GCGGCCGGGC TGCGCGCGCC GCAGCGCGTG GCCGGCCTGC ACTTCTTCAA TCCGGCGCCG
CTGATGGCGC TCGTCGAGGT GGTCAGCGGG CTCGCGACCG CGCCGGAAGT CGCGCATGCG
CTCTATGCGA CCGCCGCCGC GTGGGGCAAG CAGCCCGTGA TGGCGAAATC GACACCGGGC
TTCATCGTGA ACCGCGTCGC GCGGCCGTAT TACGCGGAGG CACTGCGCGT GCTGAACGAG
CAGGGCGGCA CGCCGGCCTC GATCGACGCG GTGATGCGCG AAGCCGGCGG CTTCCGCATG
GGGCCGTTCG AGCTGATGGA CCTGATCGGC CACGACGTGA ACTTCGCGGT GACCGAGTCG
GTGTTCCGCG CGTACTTCAA CGATCCGCGC TACACGCCAT CGCTGATCCA GCAGGAACTC
GTGAATGCGG GCTTCCTCGG GCGCAAGTCG GGGCGCGGAT TTTATTCGTA TGCTGACGGC
GCGACGCCGC CCGCGCCGGA GCTCGAAGCG CCGCGCGACG CGCCGGCTGA CGTCGTGCTC
TTCGCGCAGG ACGGCCCGGC CGCCGCGCTG CATGCACGCT TCACCGAACG CATCGCGGGC
GCGCGGCGCG ATGGCGCGCA CGCGGACGAA CTGCTCGCCG TGGCCGGGCG CGCGTCGATC
GCGCTGACCG ACGGTCGCAC CGCGACGGTG CGCGCCGCGC AAACCGGCGT GGCCGATCTC
GTACTCGTCG ATCTCGCGCG CGACTACGCG CAGGCCGGGC TGGTCGCGCT GACGCGCGCG
CTCCAGTGCG GCGACGCCGC ATACGCCGAT GCGGTCGGCC TGTTCCAGCA AGCCGGTTTC
CGCGTCGTCG GCGTCGCCGA CGTGCCGGGC CTGGTTGCGA TGCGCACCGT CGCGATGCTC
GCGAACGAGG CGGCCGACAC GGTCAACCAG GGCGTGTGCT CGCCCGCCGA TCTCGATCTC
GCGATGGAGA AGGGCGTGAA CTACCCGTGC GGCCCGCTCG CGTGGGCAGA TGCGATCGGC
ATCGGCCGCG TGCATCGCGT GCTGTCGAAC CTCGCGGCGA GCTACGGCGA GGACCGCTAT
CGCGTGTCGC CGCGCCTCGC CGCCTTGCAC GCGGCCGGTC GCACGTTCCG CTAG
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| Protein sequence | MAGSSAHSVN SGALAPSAVV GVIGAGAMGA GIAQVAAAAG HTVLLYDLNE AACDKALAGI
RAQFARLAEK GRMEPAQADA AGNRIRAVRA LAEFAGARLI VEAAAERLDV KREIFATLER
HVDETCVLAT NTSSISITSI AAGLRAPQRV AGLHFFNPAP LMALVEVVSG LATAPEVAHA
LYATAAAWGK QPVMAKSTPG FIVNRVARPY YAEALRVLNE QGGTPASIDA VMREAGGFRM
GPFELMDLIG HDVNFAVTES VFRAYFNDPR YTPSLIQQEL VNAGFLGRKS GRGFYSYADG
ATPPAPELEA PRDAPADVVL FAQDGPAAAL HARFTERIAG ARRDGAHADE LLAVAGRASI
ALTDGRTATV RAAQTGVADL VLVDLARDYA QAGLVALTRA LQCGDAAYAD AVGLFQQAGF
RVVGVADVPG LVAMRTVAML ANEAADTVNQ GVCSPADLDL AMEKGVNYPC GPLAWADAIG
IGRVHRVLSN LAASYGEDRY RVSPRLAALH AAGRTFR
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