Gene BamMC406_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4421 
Symbol 
ID6181375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1504834 
End bp1505634 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID641684182 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001811093 
Protein GI172063442 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAT TGAAGACCCT GGCCGTTGCC GTCGATGCGC GCGGCATCGC GACCGTCGCG 
CTGCAGCGTG GCGACGTGCT CAACGCGTTC GACGAGACGA TGATCGCCGA GCTGACCGAC
GCGTTCACGA CGCTCGGCCG GCGCGACGAC GTGCGCGCGA TCGTGCTGCG CTCGGACGGC
CGCGCGTTCT GCGCGGGCGC CGACCTGCAG TGGATGCAGC GCGCGAGCGC GAACGACGCC
GCCGCGAACC TGCGCGACGC CGAGCGGTTC GCCGCGATGA TGCGCGCGAT CCGGCAGTGC
CCGAAGCCGA CGGTCGCCCG CGTGCAGGGC CACGCGTTCG GCGGCGGTGT CGGCCTGTGC
GCGGCCTGCG ACATCGTGAT CGCGAGCGAT CATGCGCGCT TTTCGGTCAG CGAGGCGCGG
TTCGGAATCC TGCCGTCGGT GATCGGGCCG TATCTTGTCG AAGCGGTCGG CCAGCGCCAG
GCGCGCCGGC TCGCGCTGAC CGCGACGCAG CTCGCGGCCG GCGAAGCCGT CGCGATCGGG
CTGATCCACC AGGCCGTGCC GCTCGACGCG CTCGACGCAG CACTCGACAA GACGCTCGCG
GAACTGAGCC GCAACGGCCC CAATGCGCTG ATGGAGATCA AGCGCTTTTT CGACGAGATC
GGCGAGTACC CGCCGTCGGA CGAACGCGCG GCGTTCACCG CGCAGACGAT CTCCCGCGTG
CGGGCCACGC CGGAAGCGAA GGAGGGCTTC GCCGCGTTCT TCGCGAAGCG GCCGCCCGCG
TGGGAGCCGG GCACCGACTG A
 
Protein sequence
MDELKTLAVA VDARGIATVA LQRGDVLNAF DETMIAELTD AFTTLGRRDD VRAIVLRSDG 
RAFCAGADLQ WMQRASANDA AANLRDAERF AAMMRAIRQC PKPTVARVQG HAFGGGVGLC
AACDIVIASD HARFSVSEAR FGILPSVIGP YLVEAVGQRQ ARRLALTATQ LAAGEAVAIG
LIHQAVPLDA LDAALDKTLA ELSRNGPNAL MEIKRFFDEI GEYPPSDERA AFTAQTISRV
RATPEAKEGF AAFFAKRPPA WEPGTD