Gene BamMC406_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4416 
Symbol 
ID6181319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1499873 
End bp1500937 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content67% 
IMG OID641684177 
Productalcohol dehydrogenase 
Protein accessionYP_001811088 
Protein GI172063437 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0164512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCG CCGTCTGGCA CGGCCGCAAC GACATCCGCG TCGAAGAGGT TCCCGTTCCG 
GCGCACCCGC CGGCCGGCTG GGTCCAGATC CGCGTGCACT GGTGCGGAAT CTGCGGCTCC
GACCTGCACG AATACGTCGC CGGGCCGGTG TTCATCCCGG TCGACGCGCC GCACCCGCTG
ACGGGCCTGA AGGGCCAGTG CATCCTCGGC CACGAGTTCA GCGGCGAAAT CGCGGCGCTC
GGCGCGGGCG TGACAGGTTT CGCCGTCGGC GACCGCGTGA CGGCCGACGC GTGCCAGCAT
TGCGGCACCT GCTGGTATTG CAAGCATGGG CTCTACAACA TCTGCGAGAA CCTCGCGTTC
ACCGGGCTGA TGAACAACGG CGCGTTCGCC GAATACGTGA ACGTGCCGGC CGAGCTGTTG
TACAAGCTGC CCGAGAACTT CCCGACCGAG GCTGGCGCGC TGATCGAACC GCTCGCGGTC
GGGCTGCACG CGGTGAAGAA GGCCGGCAAC ATCGTCGGCC AGACCGTCGT CGTGGTCGGC
GCCGGCACGA TCGGCCTGTG CACTATCATG TGCGCGAAGG CCGCGGGCGC CGGACGCGTG
ATCGCGCTGG AAATGTCGGC CGCGCGCAAG CAGAAGGCGC TGGAAGTCGG CGCGACGGTC
GTGATCGATC CGAAGGCGTC GGATGCGATC GCGGAAATCA AGGCGCTGAC GGGCGGCTAC
GGCGCCGACG TGTCGTTCGA GTGCATCGGG CACACGGCCA CCGCGCAGCT CGCGATCGAC
GTGATCCGCA AGGCCGGCAA GTCGGTGATG GTCGGCATCT TCGAGGAGCC GACGTCGTTC
AACTTCTTCG ACATCGTGTC GACCGAGAAG GAAGTGATCG GCTCACTCGC GTACAACGGC
GAATTCGCGG ACGTGATCCG CTTCATCGCC GACGGCCGCA TCGACGTGCA GCCGTTGATC
ACCGGGCGGA TCGCGCTCGG CGACATCGTC ACGCACGGCT TCCAGGAGCT GGTCAACCAC
AAGGACCGGA ACGTGAAGAT CATCGTCCAG CCCGCGACGG CCTGA
 
Protein sequence
MKAAVWHGRN DIRVEEVPVP AHPPAGWVQI RVHWCGICGS DLHEYVAGPV FIPVDAPHPL 
TGLKGQCILG HEFSGEIAAL GAGVTGFAVG DRVTADACQH CGTCWYCKHG LYNICENLAF
TGLMNNGAFA EYVNVPAELL YKLPENFPTE AGALIEPLAV GLHAVKKAGN IVGQTVVVVG
AGTIGLCTIM CAKAAGAGRV IALEMSAARK QKALEVGATV VIDPKASDAI AEIKALTGGY
GADVSFECIG HTATAQLAID VIRKAGKSVM VGIFEEPTSF NFFDIVSTEK EVIGSLAYNG
EFADVIRFIA DGRIDVQPLI TGRIALGDIV THGFQELVNH KDRNVKIIVQ PATA