| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4413 |
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| Symbol | |
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| ID | 6181089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1496020 |
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| End bp | 1497492 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641684174 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001811085 |
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| Protein GI | 172063434 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.336861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAA CCCTTCCTTC CGGCACCGCG CCGCTATTGC CGCTCGACGC GCCGCTCGCG
CGCACGGCCG GTGCGCCTTC GTTGCAACGG CAATTGCTGC GCCGCGTGCG CGACGCGATT
CTCGGCGGCG CGATGCCGGC CGGCACGCGG CTGCCCGGCA CGCGCGCGCT GGCCGAAACG
CTCGGCGTGT CGCGCAACAC GACGGCGGCC GTCTACGAGC AGCTCGTCGC CGAAGGCTTC
CTGCAATCCG ATCGGCGCGG CACGCGCGTG GTGGGCCTGT CGCGGCCGGC GCCGCCGCGT
CGGCGGGCCG CGCCGCCGGT CGTCGCGCAG CGGCTCGGCC GGATGCGTCC GAGCCTGATC
GGCACCGGCG AGTCGGACGC TTTTCGGCCG GGCGTGCCCG CGCTGTCGCA TTTTCCGATC
GATGCGTGGC GGCACGCGAT CGACCGCGCG CTGCGCCGCG CCGGCCGCGA CCTGCTCGCG
TACGGCGACC CGCTCGGCGA GCGCGCGCTG CGCGAATCGA TCGCGCGCCA CCTGGCCGTG
ACGCGCGGCG TGCGCTGCGA TCCCGAGCAG ATCGTGATCA CCGAAGGCGC ACAGGGCGCG
ATCGCGCTGT GCGCGCAGCT GCTGACGAAT CCCGGCGATA CGGTCTGGGT CGAGGAGCCC
GGCTATCGCG GCGCGCGCAC CGCGATGCAG GCGGCCGATC TCGATGTCGT GCCGATGCCG
GTCGACGCGG AGGGGCTGCG CGCGGAAGGC GCGGACTGGC GCGAACGGAC GCCGCGGCTC
GTCTATACGA CGCCGTCGAA CCAGTTTCCG ACCGGCGCGG TGCTGTCGAT CTCGCGCCGG
CTCGCGCTGA TCGACGCTGC GCGCCGGCAT CGCGCGTGGA TCATCGAGGA CGACTACGAC
AGCGAGTTTC GTCACACCGG CGAGCCGATC GGCGCGTTGC AGGGGCTCGC GGCCGATTCG
CCGGTCGTCT ATCTCGGCTC GTTCAGCAAG ACGATGTTTC CGGCGCTGCG GATCGGTTTT
CTCGTGCTGC CCGACGCGTT GCTGGCCGCG GTGCGGCCGG CGCTGCCGGA GATGCTGCGC
GGCGGCACGC GTCACGTGCA GCTCGCGCTC GCCGATTTCA TCGAGTCGGG CGAGTACGGG
CGGCATCTCG GGCGGATGCG CCGGCTGTAT CGCGACCGGC GGCGCGCGCT GATCGCCGCG
CTGGACGACG CGTTCACCGC GCCGCATCAG GCCGAGGGCG GGCCGTGCGG GCTGCATCTG
GCGCTGCGGC TACCGGCGCG CTATCGGGAC CGCGCGATCG TCGAGGCGGC GCGCGAGCAT
GGCATCGGGC CGTTTCCGCT GTCGGGGTTT TCGCTCCACG CGACGTCGGC GGCCAATGGG
CTCGTGCTCG GGTTCGGCAA TACGTCGGCC GATGCGTTCG CGCCGACGCT GCGGATCTTG
TCGGCGATCG CGCATCGGGT CGCGGGGGAT TGA
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| Protein sequence | MTTTLPSGTA PLLPLDAPLA RTAGAPSLQR QLLRRVRDAI LGGAMPAGTR LPGTRALAET
LGVSRNTTAA VYEQLVAEGF LQSDRRGTRV VGLSRPAPPR RRAAPPVVAQ RLGRMRPSLI
GTGESDAFRP GVPALSHFPI DAWRHAIDRA LRRAGRDLLA YGDPLGERAL RESIARHLAV
TRGVRCDPEQ IVITEGAQGA IALCAQLLTN PGDTVWVEEP GYRGARTAMQ AADLDVVPMP
VDAEGLRAEG ADWRERTPRL VYTTPSNQFP TGAVLSISRR LALIDAARRH RAWIIEDDYD
SEFRHTGEPI GALQGLAADS PVVYLGSFSK TMFPALRIGF LVLPDALLAA VRPALPEMLR
GGTRHVQLAL ADFIESGEYG RHLGRMRRLY RDRRRALIAA LDDAFTAPHQ AEGGPCGLHL
ALRLPARYRD RAIVEAAREH GIGPFPLSGF SLHATSAANG LVLGFGNTSA DAFAPTLRIL
SAIAHRVAGD
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