| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4410 |
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| Symbol | |
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| ID | 6181421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1491654 |
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| End bp | 1493408 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641684171 |
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| Product | peptidase S1 and S6 chymotrypsin/Hap |
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| Protein accession | YP_001811082 |
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| Protein GI | 172063431 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.406194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTTT CCGAATCGTA TATGGCCGAC GCGGCGTGGA CTATAAATGG ATGCGTGTAC
CGGCGCCTGC CGGGCGTCCG CGTGTCTCGC GCGAGACGTC GCCGCGACTG CCGGGGGAGG
TGCACCGTGG TTCGCCAGAC GCTTGCTCGC GCCGTGCTTC GCACCGCGTT GATCGGGGGC
GTATTCGCCG GCATTTTGTC GTCGTCGCCG CCAACCCGTG CGGGGACCGT CGCGACGCCC
GCCCCACCGC CTGTCATGAA AAGCAGGCCC GCCGCCCGCG CTTACTCGAT GCCGGTCGAC
TTTCCGGCGA TCGTCGACCG CTACGGCCCG GCGGTCGTGA CCATCATGAC CACCGGGCCC
GACCAGCAGC CCGGTGGCCC CGCCTTCGCA ATCCTCGAAC CCGACGATCC GCTCGCCGGG
TTCTTCCGCC GCGGCGCGCA GCCGCCTGCG CCGCCACCTC CGCTCATGCC CGGGCAGGGC
CCGCAGGCGC CGTTGCCCGA TACGTCGCCG CGCGCGATCG CGGGCAGCGG CTCGGGCTTC
ATCGTCAGCC CCGACGGGCT GATCCTGACG TCCGCGCATG TCGTCGCCGA CGCGACCGAC
GTCACGGTGC GACTGGCCGA TCGTCGCGAC CTGAAGGCGA CGGTGCTGGC GGTCGATCCG
CAGAGCGACG TCGCGGTGCT GCGCGTCGAC GCGACGAAGC TGCCGTTCGT GCGCATCGGC
GATTCGGCGC GGGTGCGCGC CGGCGAACCG GTGATGACGA TCGGCGCCCC CGACGGCTCG
GGCAATACGG TGACGGCCGG CATCGTCAGC GCGACCGCGC ATCCGCTGCC GGACGGCAGC
GCGTTTCCGT TCTTCCAGAC CGACATCGCG GTGAATCCCG ACAACTCCGG CGGCCCGGTG
TTCAACCGTG CGGGCGAGGT GATCGGCATC GCGGTGCAGG TCTACACCGG CGCCGACCGC
TACGCGAGCA CGACGTTCGC GATCCCGATC GCGTTCGCCA TGAAGGTGCG CGCGCAAGCG
CAGGCGCAGA TGCGGACCAA CGCACAGGCG CAGCGCGCTT CGTCCGGCAA CGCGCTGGGC
GTCGACGTAC AGGATGTCGG CACCGGGTTG GCCGCCGCGT TCGGGCTGCC GCGTCCGGTC
GGCGCGCTCG TCAACGGCGT CGATCCCGGC TCGCCGGCCG CCGCGGCCGG CGTGAAGCCC
GGCGACGTGA TCGTGCAGTT CGGCGACAAG CCGATCGGCC AGGCTGCCGA GCTGAACGAC
CTGGCCGCCG CGTTGCCGCC TGGCGGGAAG GTGCCGCTGC GGCTGATCCG CAACCGCACG
CCGATGCGGC TGACGGTCAC GGGAGCGGCG ACCGGTGACG CGATCGACAA CGCGACTTAC
AACGCGACTT ACAACGCGCC CTACAACGCG CCCGCGACGG GCAGCGCAGG CATGGTCGGT
ACGGCCGGCG CCGCCGGCGT GGCGATGGCC GCCGCGCGGC CGGCCGATGG CGGCGATCGG
CTCGGGCTGA CGATGCATCC GCTAAGCGAT GCCGAACGGC GTTCGACCGG GCTCGCGGTC
GGGATGATGG TGGACGCGGT GCACGGGCCG GCCGCGCGCG CGGGCATCCG GCCGGGCGAT
GTCGTGCTGG AACTCAACGA CACGCTGCTC GAAACGCCGG AAGACGTGCC GGCGCTCGAA
GCGAGCGGCG GCGTGATCGC GGTGCTCATC CAGCGCGAGA ACGCGCGCAA GTTCGTGTCG
GTGCGGGCGC GGTAG
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| Protein sequence | MRVSESYMAD AAWTINGCVY RRLPGVRVSR ARRRRDCRGR CTVVRQTLAR AVLRTALIGG
VFAGILSSSP PTRAGTVATP APPPVMKSRP AARAYSMPVD FPAIVDRYGP AVVTIMTTGP
DQQPGGPAFA ILEPDDPLAG FFRRGAQPPA PPPPLMPGQG PQAPLPDTSP RAIAGSGSGF
IVSPDGLILT SAHVVADATD VTVRLADRRD LKATVLAVDP QSDVAVLRVD ATKLPFVRIG
DSARVRAGEP VMTIGAPDGS GNTVTAGIVS ATAHPLPDGS AFPFFQTDIA VNPDNSGGPV
FNRAGEVIGI AVQVYTGADR YASTTFAIPI AFAMKVRAQA QAQMRTNAQA QRASSGNALG
VDVQDVGTGL AAAFGLPRPV GALVNGVDPG SPAAAAGVKP GDVIVQFGDK PIGQAAELND
LAAALPPGGK VPLRLIRNRT PMRLTVTGAA TGDAIDNATY NATYNAPYNA PATGSAGMVG
TAGAAGVAMA AARPADGGDR LGLTMHPLSD AERRSTGLAV GMMVDAVHGP AARAGIRPGD
VVLELNDTLL ETPEDVPALE ASGGVIAVLI QRENARKFVS VRAR
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