Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4408 |
Symbol | |
ID | 6180760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1489399 |
End bp | 1490097 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641684169 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001811080 |
Protein GI | 172063429 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.212446 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCAT ACGTCATCGA CGCTTCCGAG CGTCCTTCCG TCGAAGTCGA CCAGTCGTCC GCGCGCTTTC CGGTGCGCCG CGTGTTCTGC GTCGGCCGCA ACTACGCCGA TCACGCGCGC GAAATGGGCG CCGATCCCGA CCGCGAACCG CCGTTCTTCT TCACGAAGCC GGCCGACGCG ATCGTCCCGG CCGGCGGCAC CGTCCCGTAT CCGCCGCTGA CCAGCGACCT GCATCACGAA ATCGAGCTGG TGGTCGCGAT CGGCAAGGAC GGCCGGTCGA TCGACCCGGC CGACGCGCTG TCGCACGTGT GGGGCTACGG CGTCGGCGTC GACCTCACGC GCCGCGACCT GCAGGCCGAG GCAAAGAAAC TGAGCCGGCC GTGGGACTGG GCGAAGGGCT TCGACGCGTC GGGCCCCGTG ACCGCGCTGC GCTCGGCGAG CGTCACCGGC CATCCGGCGA GCGGGCGGAT CTGGCTCGCG GTAAACGGCG AAACGCGCCA GCAAGGCGAT CTCGCCGACA TGATCTGGGC CGTGCCGGAC GTGATCGCGT ACGTGTCGCG CTCGGTCGAG CTGAAGGCCG GCGACCTGAT CTTCACCGGC ACGCCGGCCG GCGTCGGCGC ACTTCAGCCG GGCGATCGCA TGACGGGCGG CGTCGATGGG GTGGCGACAT TCGAGTTCGT GATGGGAGCG AAGCCGTAA
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Protein sequence | MSAYVIDASE RPSVEVDQSS ARFPVRRVFC VGRNYADHAR EMGADPDREP PFFFTKPADA IVPAGGTVPY PPLTSDLHHE IELVVAIGKD GRSIDPADAL SHVWGYGVGV DLTRRDLQAE AKKLSRPWDW AKGFDASGPV TALRSASVTG HPASGRIWLA VNGETRQQGD LADMIWAVPD VIAYVSRSVE LKAGDLIFTG TPAGVGALQP GDRMTGGVDG VATFEFVMGA KP
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