| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4400 |
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| Symbol | |
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| ID | 6179248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1479408 |
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| End bp | 1482005 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684161 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_001811072 |
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| Protein GI | 172063421 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.3242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0318219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA TCGTCATCGG CCACGGGATG GTCGGACACA AGCTCCTCGA ATGCGTCGCG
GCGCAAGCCG GCGCGGCGGA TGCGCTGCAG GTCACGGTGC TCGGCGAGGA GCCGCGCCCG
GCGTACGATC GCGTGCACCT GTCGGAATTC TTCGCGGGCA AGTCGGCGGA CGACCTGTCG
CTCGTCGAGC CCGGCTTCTT CGAACGCCAT CCGCGGTTCG ACCTGCGCCT GAACGCGTGC
GTCGCGTCGA TCGACCGCGC CGCGCACACG GTCACGCTCG CGTCGGGCGA GACGCTCGCG
TACGACAAGC TGGTGCTCGC GACGGGCTCG CGACCGTTCG TGCCGCCGGT GCCGGGCCGC
GACCGCGCGG GCTGCTTCGT GTACCGGACG ATCGAGGATC TCGAGGCGAT GCAGGCGTGC
GGCGCGCATG CGAAGCGTGG CGTCGTGATC GGCGGCGGGC TGCTCGGCCT CGAATGCGCG
AAGGCGCTGC GCGACATGGG GCTCGAGACG CACGTCGTCG AATTCGCGCC GCGGCTGATG
GCCGTGCAGG TCGACGACGG CGGCGGCCGG ATGCTGCGCG CGAAGATCGA GGCGCTCGGC
GTGACCGTGC ATACGGGCAA GAACACGCTC GAGATCGTCG ATGGCGAGGA AGGTACCCAT
CGGATGGCGT TCGCCGACGG CTCGCATCTC GACACCGACA TGATCGTGTT CTCGGCCGGC
ATCCGCGCGC GCGACGAACT GGCACGCGCG TGCGGCCTGG ACATCGGCCC GCGCGGCGGC
GTCGCGATCG ACGACGCGTG CCGCACGAGC GACGCCGACA TCTACGCGAT CGGCGAATGC
GCGGCCTGGA ACGGGATGGT GTACGGCCTC GTCGCGCCCG GCTACGACAT GGCGCGCGTG
GTCGCGAAGC AGCTCGCGGG TGACGCTGAC GAAGCGGCCG CGGCCGCGTT CGCCGGCGCC
GACATGAGCA CGAAGCTCAA GCTGATGGGC GTCGACGTCG CGAGCATCGG CGACGCGCAC
GGCACGACGG CCGGCAGCCG CACCTACCAG TACGCGGACG AGCGTCGCCA GGTCTACAAG
AAGCTGGTGG TGTCGGATTG CGGCAAGTTC CTGCACGGCG CGGTGATGGT CGGCGACGCG
GCCGAATACG GCACGCTGCT GCAGATGATG CTGAACCGGA TCGAGCTGCC CGAGTCGCCG
GAGTTCCTGA TCCTGCCGTC GTCGGACGGC GCGGCGAAGC CCGCGATCGG CGTGGATGCG
CTGCCGGAAG GCGCGCAGAT CTGCTCGTGC AACAACGTGT CGAAGTCGCA GATCTGCGCG
GCGGTGGCCG ATGGCGCGAC GAGCCTCGGC GCACTGAAGT CGTGCACGGG CGCGGGCACG
TCGTGTGGCG GCTGCGTGCC GCTCGTCACG CAGATCATGA AGGCCGAGAT GAAGAAGCAG
GGCCTCGCGG TCAACAACCA TCTGTGCGAG CACTTCCCGC ATTCGCGCCA GGAGTTGTTC
CACCTGATCC GCGTCGAGCG CATCACGACC TTCGACGAGC TGCTCGCGAA GCACGGCCGC
GGCCTGGGCT GCGACGTGTG CAAGCCGGCC GTCGCGGGCA TCCTCGCGTC GTGCTTCAAC
GAGTTCGTGC TGAAGAAGGA GCATGCGGGG CTGCAGGACT CGAACGACTA CTACCTCGCG
AACATCCAGC GCGACGGCAC GTACTCGGTC GTGCCGCGCA TGCCGGGCGG CGAGGTGACG
CCGGAAGGGC TGATCGCGGT CGGCCAGGTC GCGCGCAAGT ACGGCCTCTA CACGAAGATC
ACGGGCGGCC AGCGCGTCGA CCTGTTCGGC GCGCGCGTCG AGCAGCTGCC GTCGATCTGG
GAAGAGCTGA TTGCCGCGGG CTTCGAATCG GGTCATGCGT ACGGCAAGTC GGTGCGCACC
GTGAAGTCGT GCGTCGGCTC GACGTGGTGC CGCTACGGCG TCGACGATTC GGTCGGTCTC
GCGATCGACA TCGAGAACCG CTACAAGGGC TTGCGCGCGC CGCACAAGAT CAAGTTCGGC
GTGTCGGGCT GCACGCGCGA GTGCGCGGAA GCGCAGGGCA AGGACATCGG GATCATCGCG
ACCGAGAAGG GCTGGAACCT GTACGTATGC GGCAACGGCG GGATGAAGCC GCGCCACGCG
GAACTGATCG CGTCCGACCT CGACCGTGCC ACGCTGATCC GCTACATCGA CCGCTTCCTG
ATGTTCTACG TGCGCACCGC CGACCGGCTG CAGCGCACCA GCGTGTGGCG CGACAACCTC
GAAGGCGGGC TCGACTACCT GACCGACGTC GTCGTGCACG ACAAGCTCGG CATCGCGGCC
GAACTCGAGG CCGACATGCA GCACGTGGTC GATACCTACG AATGCGAATG GAAGAAGGCC
GTCACCGATC CGGAAACGCG CAAGCGCTTC CGCCACTTCG TGAACAGCGA CGCGCCGGAC
GCGAACATCG CCTTCGTCGA GACGCGCGGC CAGATCCGTC CCGCGACGCC CGACGAACGC
GTGGGCGGCA GGCCCGTGGG GATTCCGGTC GTCGCGGAAG CGGCCACCGA ATCCGCAACC
GAATCTGCAA CCGTTTGA
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| Protein sequence | MKLIVIGHGM VGHKLLECVA AQAGAADALQ VTVLGEEPRP AYDRVHLSEF FAGKSADDLS
LVEPGFFERH PRFDLRLNAC VASIDRAAHT VTLASGETLA YDKLVLATGS RPFVPPVPGR
DRAGCFVYRT IEDLEAMQAC GAHAKRGVVI GGGLLGLECA KALRDMGLET HVVEFAPRLM
AVQVDDGGGR MLRAKIEALG VTVHTGKNTL EIVDGEEGTH RMAFADGSHL DTDMIVFSAG
IRARDELARA CGLDIGPRGG VAIDDACRTS DADIYAIGEC AAWNGMVYGL VAPGYDMARV
VAKQLAGDAD EAAAAAFAGA DMSTKLKLMG VDVASIGDAH GTTAGSRTYQ YADERRQVYK
KLVVSDCGKF LHGAVMVGDA AEYGTLLQMM LNRIELPESP EFLILPSSDG AAKPAIGVDA
LPEGAQICSC NNVSKSQICA AVADGATSLG ALKSCTGAGT SCGGCVPLVT QIMKAEMKKQ
GLAVNNHLCE HFPHSRQELF HLIRVERITT FDELLAKHGR GLGCDVCKPA VAGILASCFN
EFVLKKEHAG LQDSNDYYLA NIQRDGTYSV VPRMPGGEVT PEGLIAVGQV ARKYGLYTKI
TGGQRVDLFG ARVEQLPSIW EELIAAGFES GHAYGKSVRT VKSCVGSTWC RYGVDDSVGL
AIDIENRYKG LRAPHKIKFG VSGCTRECAE AQGKDIGIIA TEKGWNLYVC GNGGMKPRHA
ELIASDLDRA TLIRYIDRFL MFYVRTADRL QRTSVWRDNL EGGLDYLTDV VVHDKLGIAA
ELEADMQHVV DTYECEWKKA VTDPETRKRF RHFVNSDAPD ANIAFVETRG QIRPATPDER
VGGRPVGIPV VAEAATESAT ESATV
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