| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4391 |
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| Symbol | |
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| ID | 6180318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1465582 |
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| End bp | 1467015 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684152 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001811063 |
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| Protein GI | 172063412 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.046272 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT ACGAAACCCT CGCCCACACG ATCGCCGACG AAATCCGCAA CGGCAACCTC
GCGGTCGGCA CGCGCCTGCC GTCGCTGCGG CAGATCATCG CGCAACATGG CGTGAGCCAG
TCGACGGTGT TTCGCGCGTA CTACCTGCTC GAACAGTGGG GGTTGATCCG CGCACGCGAG
CGCTCCGGTT ATTACGTCGC GCCGGGCGCG AGCCCCGCCG CGAACGCGCC CGCGAAACGC
CGCGCGAGCC GCGCCGGCGC GACCCGCAAG GTCGACATCA GCGATCTCGT GTTCTCGGTG
CTCGACGCCG CGACGCAGCC CGGCATCGTG CCGCTCGGCT CCGCATTTCC GTCGCCGCAG
CTGTTTCCGC TGCAGCGCCT CGCGAAGTCG CTCGCGCAGG CGACGCGGCT CGTCAGCCCG
TGGAGTACGG TCGTCGATCT GCCGCCTGGC AACGAGGCGC TGCGCCAGCA GATCGCGCGA
CGCTATCTGG CGACCGGCAT CGCGCAGCCC GTCGACGAGA TCGTCGTCAC GAACGGCGCG
CTGGAAGCGC TGAACCTGTG CCTGATGGCC GTCACGCGGC CCGGCGACAT CGTCGCGGTC
GAGTCTCCCG GCTTCTATGC GGCGCTACAG GCGATCGAGC GGCTCGACCT GCGTGCGGTC
GAGATTCCCG TCGATCCGCA CACGGGCCTC GATCTCGACG CGCTCGCGAA CGCGCTCGAG
CGACGCGACA TCCGCGCGTG CTGGTTCATG ACCAATTTCC AGAATCCGAC CGGCGTAACG
CTGTCGGCCG ACAAGAAGCG CGCGCTCGTG GAGATGCTCG CCGCGCGCGA GGTGCCGCTG
ATCGAGGACG ACGTGTACGG CGAGCTGCAT TTCGGCGCCG ACTACCCGCT GCCCGCGCGC
GCCTACGACC GGCACGGCCT CGTGATGCAT TGCAGTTCGT TCTCGAAGAC GCTCGCGCCC
GGCTACCGGA TCGGCTGGGC CGCCGCCGGC CGTTTCGCGG AAAAGGTGCA GCGGCTCAAG
CTGATGACCA CGCTGTCGGC GAGCATTCCT GCGCAGGCCG GCATCGCGAA CTACCTGGAG
CATGGCGGCT ACGATCGTCA CCTGCGCAAG CTGCGCGGTG CGCTGCAGAC GCAGCTCGCC
CGCATGGACG ACGCGCTGCG GCGCTGGCTG CCGCCCGGCG TGGAATGGGC GCGGCCGGAC
GGCGGATATT TCCTGTGGCT GTCGTTTCCC GACGCGATCG ACGCGATGGA ACTGCATCGA
CAGGCGATCG CGCGCGGCAT CAGCTTCGCA CCCGGGCCGC TGTTCTCGGC CGCGCACGGC
TTCGAGCGCT GCGTGCGCGT GAACTTCGGC CATCCGTGGA GCCACGACAT CGAACGCGCG
ATTCGCGTGC TCGGCGAGCT GGTCGCCGAA CCGGCCGTAC GCAAGGCCGG GTAA
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| Protein sequence | MKRYETLAHT IADEIRNGNL AVGTRLPSLR QIIAQHGVSQ STVFRAYYLL EQWGLIRARE
RSGYYVAPGA SPAANAPAKR RASRAGATRK VDISDLVFSV LDAATQPGIV PLGSAFPSPQ
LFPLQRLAKS LAQATRLVSP WSTVVDLPPG NEALRQQIAR RYLATGIAQP VDEIVVTNGA
LEALNLCLMA VTRPGDIVAV ESPGFYAALQ AIERLDLRAV EIPVDPHTGL DLDALANALE
RRDIRACWFM TNFQNPTGVT LSADKKRALV EMLAAREVPL IEDDVYGELH FGADYPLPAR
AYDRHGLVMH CSSFSKTLAP GYRIGWAAAG RFAEKVQRLK LMTTLSASIP AQAGIANYLE
HGGYDRHLRK LRGALQTQLA RMDDALRRWL PPGVEWARPD GGYFLWLSFP DAIDAMELHR
QAIARGISFA PGPLFSAAHG FERCVRVNFG HPWSHDIERA IRVLGELVAE PAVRKAG
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