Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4390 |
Symbol | |
ID | 6179942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1463941 |
End bp | 1465065 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684151 |
Product | extracellular solute-binding protein |
Protein accession | YP_001811062 |
Protein GI | 172063411 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.243685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0624884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATACGG GGAATTCGGA CGGGGACCGA TTGGTCAGGG GAATCGGCGC GCACCGGCGT GCGCGCGGTG CCGTGTGCCG GTTGTTTGTC GTCTTGACAC TGGGCCTGCC GGGCCTGCCT GCGTGTGCCG CGTCTCCCGA AACCGTCGGC GACAACGTGC TGCGTGTGCT CGCGTGGCCC GGCTATGCGG ACAGCGATGT CGTCAATGCA TTTGAGACGC ACTTTCATGT ACGCGTCGAA GTGACGTTCG TCGATTCCGA CGAAGCGTTG TGGACGCGGA TGCACAGCGC ATCGCCGCCG CCGTACGACG TGCTCGCGGC CAACACGGCC GAGATCCAGC GCTACGCGCG CGAAGACCTG CTTACACCGA TCGACCTGTC GCAGATCCCG AACCGCCGGC GGCAACTGCC GAATTTCCAG CAGCTTGCGA CGATCGGCGG GCTCGTGCGC AACGGCTCGA CGTACGCGAT TCCGTTCACG TATTCGTCGA TGGGGCTGAT CTACGATCGC AAGCAGGTGC CGGCGCCGCC GCGCTCGATG CTCGAGCTCT GGAACCCGCG CTACCGCGGC AAGGTGCTCG ACTTCAACAG CGCGCAGCAT AATTTTTCGT TCACCGCGCT CGCGCTCGGC TATGCCGATC CGTTTCACCT GTCGCCCGCG CAGACGCTTG CCGTCGCGCA CAAGCTGATC GACCTGCGAC GCAACCTGCT CACGTATTAC ACGCTTCCCG AAGAAGCGAC CGCGCTGTTC ATCCGGCATC GCGCGGCGCT GATGTTCGGC AACTACGGCA CGCAGCAGGT CGAGCAACTG CGTCGCGCCG GCGCGGATGT GGGCTACGTG ATTCCGGACG AAGGCGCGCT CGCGTGGCTC GACTGCTGGG GCGTCACGCG TGGCGCCGAG CATCGCGAGC TCGCGTTCGC ATGGATCAAT TACATGCTCG AACCGGTGAT CGGCGCGCTG CTGACCGAGC GCCAGGGGCT CGCGAATACG CTCGCGCCGC CACCCGGCCT CCAGACCGGC CACCAGCACC TCGTGTGGCT CCAGCCGGTC GAGGACATCG CGCGGCGCGA GTCGCTGTGG AGCCGCATCG TGTCGGGCGA CCGGCCGGAG TGGTTCGAAA AATGA
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Protein sequence | MHTGNSDGDR LVRGIGAHRR ARGAVCRLFV VLTLGLPGLP ACAASPETVG DNVLRVLAWP GYADSDVVNA FETHFHVRVE VTFVDSDEAL WTRMHSASPP PYDVLAANTA EIQRYAREDL LTPIDLSQIP NRRRQLPNFQ QLATIGGLVR NGSTYAIPFT YSSMGLIYDR KQVPAPPRSM LELWNPRYRG KVLDFNSAQH NFSFTALALG YADPFHLSPA QTLAVAHKLI DLRRNLLTYY TLPEEATALF IRHRAALMFG NYGTQQVEQL RRAGADVGYV IPDEGALAWL DCWGVTRGAE HRELAFAWIN YMLEPVIGAL LTERQGLANT LAPPPGLQTG HQHLVWLQPV EDIARRESLW SRIVSGDRPE WFEK
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