| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4370 |
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| Symbol | |
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| ID | 6179311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1448027 |
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| End bp | 1449415 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684132 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001811043 |
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| Protein GI | 172063392 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.701723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGCG AACCCTCACA TTCCGCGCTG CTGTGGATCG TCGCCGCTGC GTTCTTCATG
CAGTCCCTCG ACACGACGAT CGTCAACACC GCGCTGCCGT CGATCGCGCA AAGCCTGCAT
GCGTCGCCGC TCGCGATGCA GCCGGTCGTG GTCGTCTACT CGCTGACGAT GGCGATGCTC
ACGCCGGCGT CCGGCTGGCT CGCCGATCGG TTCGGCACGC GTCGCGTGTT CTCGCTCGCG
ATCCTCGTGT TTTCGCTTGC ATCGATCGGC TGTGCCGCAT CGCATACGCT CGGCCAGCTC
GTCATCGCGC GTGCCGTGCA GGGCATCGGC GGCTCGATGC TGCTGCCGAT CGGGCGGCTT
GCGGTGTTGC GCCGCGTGCC GGGCGAACAG TACGTCGCGG CAATCGCGTT CGTGTCGATC
GCCGGGCAGC TCGGCCCGAT CGTCGGGCCG ACGCTCGGCG GCTGGCTCAC GCAGGCGATT
TCCTGGCACT GGGTGTTCAT CGTCAACGTG CCGGTCGGCG TGGTCGGCTT CATCGCGGTG
CAGCGCTTTC TGCCGCACGA CCAGGCGACG CAGCCGCCGC CGTTCGACTT CGTCGGCTGT
GCGCTGCTGT CGGCCGCGAT GCTCGCGCTG TCGCTCGCGA TCGATCCGCC GATGCCCGCG
CACCGCGCCG GCTGGGCGAT CGGGCTCGCC ATGCTCGGCA TGGCGAGTGC GCTCGCTTAC
CTGCCCCACG CGCGACGCCG CGCGCAGCCG CTGTTCCGGC TCGGGTTGTT CCGCGAGCCG
AACTTCGGCT CGGGGCTGCT CGGCAACCTG CTGTGCCGGA TCGGCACGAG CGCGGTGCCG
TTCATGCTGC CGCTGCTGAT GCAGGTGCAG CTTGGCTATA CGCCGCTGCA GTCGGGGATG
ATGATGCTGC CGGCCGCGAT CGCCGGCGTG ATCGCGAAGC GCTGGATCGC GCCGCTCGCG
AAACGCTTCG GCTATGCGAC GTTTCTGGTC GTGAACACGG GGATCGTCGG CTGCGCGATC
GCGGGATTCG CGCTGGTGTC GGCGCGGCCC GCGCCGGCGC TGGAGATGGC GTTGCTGATC
GTGTTCGGCG CCGCGAACTC GATGCAGTTC GCCGCGATGA ACGCCGTGAC GCTCAAGGGG
CTGTCGCACG CCGACGCCGG TAGCGGCAAC AGCCTGTTCA CGATGATGCA GATGCTGGCG
ATGGGGCTCG GCGTGTCGAT CGGCGGCGGG CTCGTGAACC TGTTCGCCGC GCATTGGGGC
TCGATGGCGA ACGGCTTCAT GTTGTCGTTC GTCTGCATGG GCTCGGTCAC GCTGCTGTCG
TCGGTCGTGT TCCGGCGGAT CGATACCGCC GCGCCGCCTA GGCCGGTTGC GCCGGGGGCG
TCGGCGTAA
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| Protein sequence | MSREPSHSAL LWIVAAAFFM QSLDTTIVNT ALPSIAQSLH ASPLAMQPVV VVYSLTMAML
TPASGWLADR FGTRRVFSLA ILVFSLASIG CAASHTLGQL VIARAVQGIG GSMLLPIGRL
AVLRRVPGEQ YVAAIAFVSI AGQLGPIVGP TLGGWLTQAI SWHWVFIVNV PVGVVGFIAV
QRFLPHDQAT QPPPFDFVGC ALLSAAMLAL SLAIDPPMPA HRAGWAIGLA MLGMASALAY
LPHARRRAQP LFRLGLFREP NFGSGLLGNL LCRIGTSAVP FMLPLLMQVQ LGYTPLQSGM
MMLPAAIAGV IAKRWIAPLA KRFGYATFLV VNTGIVGCAI AGFALVSARP APALEMALLI
VFGAANSMQF AAMNAVTLKG LSHADAGSGN SLFTMMQMLA MGLGVSIGGG LVNLFAAHWG
SMANGFMLSF VCMGSVTLLS SVVFRRIDTA APPRPVAPGA SA
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