| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4352 |
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| Symbol | |
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| ID | 6180309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1434182 |
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| End bp | 1435363 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684118 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_001811029 |
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| Protein GI | 172063378 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.446687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCGCC ATTTCACCAG AACCGGCGTC GCGCTCGCCG CGATCGCTGC GGCATGCACG
CTGGCCGCGT GCGGCGGCGG CGACATCACC GCACCGACCG TGGCCGCTAA TAGCATCGGC
ACGAGTACGA GCGTGACCGG TGGGATTAGT GGGACTAACG GAACTAACGG AACCAGTGGA
ACCAGTGGAA CCAGTGGAAC CAGTGGAACC AGTGGAACCA GTGGAACCAG TGGAACCAGT
GGAACCAGTG GAACCAGTGG AACCAGTGGA ACCAGTGGAA CCAGCGGCAC GACGAGCGGC
GGTTGGGGCA CCAGCGGCGC GCCCGGCACG AACGGTGTCG TCAGCACGGT CGGGCAGATC
GTGATCGACG CCGGCACCAC GGTCGGCGAC GTGACTTTGC CGGGCGTCGG CAAGAGCCTC
ACCGCGGGCC CGGGCGCGAC CATCACAGGC GTGGGCTCGA TCATCCGCGA CACGGCGAAC
GCGGGGAGCG GTGGCATCAG CCAGATCGGC ATCACGCCGG ACCCGGTCGG CAGGACAGTC
ACCGGACTCG GCACCGTCGT CAGCTCCACG GGCAATCCCG TCCTGGGCCT AAGCGAGACG
GTCAGGGCGC TCGGCGCGGG CCCGCTGTCG CCGCTCGCAC CCATCACGAC GCCGGTCGGC
GGCCTGCTCG ACACGGTCGC CCACGGGCTG CAGTCGGCGG GCGCCATGGT CGGCTCGACC
GTGTCGTCGG GTCCGGTGCA GCAGGCGACC CGGACGGCCG GCTCGGCGAT CACGCCACTC
GTGACGACGG CCGGCAACCT CACCCAACAG GTCGGCACAG CGACCGGCCT CGGTCAGCCT
GTCGCCGGCC TGCTCGGGCA GGTCGGCGGG GCGATCACCT CGGCCGGAAC GAAGGTGTCA
GCCGCGTCGT CACAGCCGGT CGTCGGCGAT GTCGGGCAAC TCGTCCGAGC GGTCGGCAAT
ACGGTGACCA ACGCGGGCGG TCTCGTGAAT CCGAACGGAG CAAACGGCGT CGCGCCGGTG
GCAGGCCTGC TGACGAGTGT GGTTGGCGGG ATACCGGCGA CCGTGCACAA CGGTCCCGGC
ACCGGTACGA GCGGCGGTGC GACGTCGGGC GGTACGAGCA ATCCGCTCGC GCCGGTCACG
TCGCTCGTCG GCGGCTTGTT CGGCGGAGCG GTCGGCAGGT GA
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| Protein sequence | MHRHFTRTGV ALAAIAAACT LAACGGGDIT APTVAANSIG TSTSVTGGIS GTNGTNGTSG
TSGTSGTSGT SGTSGTSGTS GTSGTSGTSG TSGTSGTTSG GWGTSGAPGT NGVVSTVGQI
VIDAGTTVGD VTLPGVGKSL TAGPGATITG VGSIIRDTAN AGSGGISQIG ITPDPVGRTV
TGLGTVVSST GNPVLGLSET VRALGAGPLS PLAPITTPVG GLLDTVAHGL QSAGAMVGST
VSSGPVQQAT RTAGSAITPL VTTAGNLTQQ VGTATGLGQP VAGLLGQVGG AITSAGTKVS
AASSQPVVGD VGQLVRAVGN TVTNAGGLVN PNGANGVAPV AGLLTSVVGG IPATVHNGPG
TGTSGGATSG GTSNPLAPVT SLVGGLFGGA VGR
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