| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4348 |
|---|
| Symbol | |
|---|
| ID | 6180055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1430089 |
|---|
| End bp | 1430727 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641684114 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001811025 |
|---|
| Protein GI | 172063374 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTCA TCAAGTCCGT CGTGATGGGA TTGTCGATCG CGGTGCCGGT CGGCCCGATC
GGGATGCTGT GCATCCAGCG CAGCCTGAGC CGAGGCTTTC ACGCGGGATT CGCCACCGGC
ATCGGCGCTG CGTGCGCCGA TGCGGTCTAC GGGCTGCTCG GCGCGCTGGG CGTCGCTGGC
ATCGTCACCG CGTTTCCGAT GCTGACCGTC GCGCTGAAAA TCGGCGGCGG CGCGTTCCTG
GTGTGGCTGG CCTGGACCAT CGCGCGGCAG GCGCCGGCTG CATCGGCGGC ACAGCGCGAC
TTGCCGCGCA CGACCGTGCT GCGCGATTTC CTGACGACGT TCGGCCTGAC GCTGTCGAAT
CCGATGACGA TTCTGTCATT CGTCGGGATT TTCGCGGCGC TCGGCCCGCT GACCGGCACG
CATGAGGTTG CGATGGGGCC GACGGTCGCG CTGATGGTCG CCGGCGTGTT CGTCGGCTCC
GCGACGTGGT GGCTGTGCCT GAGCAGCGCG ACCGCCGCAT TGCGCACGAA GATGCCGCTG
ACGTTCATGC ACGGGCTGTC GCGCGTGTCG GCCGTCGTGA TCGCGGTGTT CGGCGCGGTC
CAGTTGATTG CGGGCGTACA CGGCATCGTG TGGTCCTGA
|
|---|
| Protein sequence | MLFIKSVVMG LSIAVPVGPI GMLCIQRSLS RGFHAGFATG IGAACADAVY GLLGALGVAG
IVTAFPMLTV ALKIGGGAFL VWLAWTIARQ APAASAAQRD LPRTTVLRDF LTTFGLTLSN
PMTILSFVGI FAALGPLTGT HEVAMGPTVA LMVAGVFVGS ATWWLCLSSA TAALRTKMPL
TFMHGLSRVS AVVIAVFGAV QLIAGVHGIV WS
|
|---|
| |