| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4347 |
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| Symbol | |
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| ID | 6179613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1428098 |
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| End bp | 1430026 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684113 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001811024 |
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| Protein GI | 172063373 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTTC GCCACCTTCT CGCCACGTCC GCCGCCACCG CGCTCCTCTC CCCGATCGCC
CATGCTGCCG GCGACACGGC GCCCGCGCAG CCGCCCCAGC CCGCCGATGG CATCGACCTG
CCGGCGATCA CCGTGACCGA CACGCGGCAT CTGCCCGAAT CGTTCGACCA GCGCTATGCG
ACGACGCAGG TGCTCACGCG CGCCGATCTC GACCGCCTGT CGCCGAGCGA GCCGAGCATC
ACGCAGGCGC TCGCGATGCT GCCGGGCGTG ACCGTCTCGC AGACCGGCGG CCCCGGCTCG
TCCGCGTCGG TCAGCATCCG CGGCTCGTCG GCCAGCCAGG TCGCGGTATT CATCGACGGG
ATCCGGATCG GGTCGCCGAC CACCGGCATC GCGCCGTGGG CCGACCTGCC GACCGAAGCG
TTCGAGCGCG TCGAAGTGAT TTCGGGGCCG GCCGCCGCAT CGTTCGGCGC GAACGCGATG
GGCGGCGTCG TGCAGCTGTT CACGCGCCGC GCCGCCGGCC AGCCCAACCA GACGAGCGTG
TCGTTCGGCG GCGGCTCGAA CAAGACCTTC GACACGCAGC TGCGCACGTC GGGCACCGTG
CCGTCGACCG GGCCGCTGGC CGCGCTCGGC GGACTCACTT ACTCGCTCGG CCTGCACTCG
TACAACACCG CCGGCATCGA CGCGACGCGG CCCGTGTTGC CATACCACGA GGACGGCCGC
AATCCGTATC ACGCGCAGGA TCTCGATGCG CGCCTCGGCT ACGCACGCGA TAACTGGTCG
ATCTCGACGT TCGCGCTGTA TCACCGCTCC GACCTGTCCT ATGACAACGC CGGCTTTGCG
AACCGCGAGC TCGATCATCA GCTGACGACC GGCATCGCGT TCCATCTCGA CATCACGCCC
GACACGCAGT TCGACCAGTC GTTTGGTTAT GCGAACGACC GCCAGTTCCT GTATGCGAGC
GACCCGTCCA TCCGGACCGA CCGGATCGAC TCGCAGCGCA TCAGTTCGTC GACGTCGCTG
ACCCATCAGG CGCACGGCTT CCACCTGTTC GGCCTGCCGC TGTCGGGCGA GACGAAGGTC
GCGTACGACT TCACGCGCGA GCAGGCGTTC CTGCCGATCG ACGTGCCGGA CGGCGTGCCC
ACGCGCAACG ATTCCGCGTT CTCGCTGCAT CAGTCGGCGA CGCTCGGCAG CGTGACGATG
TTCGTCGCGG GCCGTCACGA GATCATCGCG GGGAAAACCG TGAACACCGG CAACGCCGCG
TTGTCGTGGG CGATCACGCC GGTCTATACG GCGCGCGTGT CGTACGGCAA TGCATTCCGC
CTGCCGTCGT TCAACGACCT GTACTACCCC GGTTACGGCA ATCCGAACCT GAATCCGGAG
CGCAGCGATT CGGTCGAAGC CGCGCTCGAA GCGAACACCG CGTACGGCAC GTTCAGCGCC
GCGATCTACG ATACGCGCGT CAACAACCTG ATCGCGTACA ACCCGGCGAC GTTCTCGCCG
ATGAACATCG GCCGCGCGCA TATCCGCGGC ATCGACCTGT CGTACAAGGG CACGATCGGT
CGCACGACGC CGGTGAGCAT CGCGGTGGGG ATTCTCAATC CGCAGGACGA AACCAACGGC
AGCTGGCTCA ACCGCCGGCC GCGCCAGACG GTCAGCGTGA ACATCGACCA CACGTGGGAC
GAACTGCACC TGCATGCACT GAGCACCGGC GCATCGCTGA ACTACGGCGG CACGACGTTC
GACGACCCGG CCAACGCCAC GTATCTGCCG TCGTATCTGA CCGTGAACCT GCGCGCGTCG
TACAAGATCA ATGCGCACCT GACGGTGTCG GCGACGCTGT CGAACCTGTT CGACCGTCAG
TACGTGACTG CGTACGGCTA CAACACGCTC GGGCGCACCG CGTTCGGTAA GGTCAGCTAT
ACGTTCTGA
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| Protein sequence | MNLRHLLATS AATALLSPIA HAAGDTAPAQ PPQPADGIDL PAITVTDTRH LPESFDQRYA
TTQVLTRADL DRLSPSEPSI TQALAMLPGV TVSQTGGPGS SASVSIRGSS ASQVAVFIDG
IRIGSPTTGI APWADLPTEA FERVEVISGP AAASFGANAM GGVVQLFTRR AAGQPNQTSV
SFGGGSNKTF DTQLRTSGTV PSTGPLAALG GLTYSLGLHS YNTAGIDATR PVLPYHEDGR
NPYHAQDLDA RLGYARDNWS ISTFALYHRS DLSYDNAGFA NRELDHQLTT GIAFHLDITP
DTQFDQSFGY ANDRQFLYAS DPSIRTDRID SQRISSSTSL THQAHGFHLF GLPLSGETKV
AYDFTREQAF LPIDVPDGVP TRNDSAFSLH QSATLGSVTM FVAGRHEIIA GKTVNTGNAA
LSWAITPVYT ARVSYGNAFR LPSFNDLYYP GYGNPNLNPE RSDSVEAALE ANTAYGTFSA
AIYDTRVNNL IAYNPATFSP MNIGRAHIRG IDLSYKGTIG RTTPVSIAVG ILNPQDETNG
SWLNRRPRQT VSVNIDHTWD ELHLHALSTG ASLNYGGTTF DDPANATYLP SYLTVNLRAS
YKINAHLTVS ATLSNLFDRQ YVTAYGYNTL GRTAFGKVSY TF
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