Gene BamMC406_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4342 
Symbol 
ID6179421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1425077 
End bp1425715 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID641684108 
ProductYheO domain-containing protein 
Protein accessionYP_001811019 
Protein GI172063368 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CACGCCCCCG GCCGCAACTG GAGCAGGCAT CGCTGATCGA GCAGGTGCTG 
CGCATCGCCG AAGGGCTCGG CGCGATGTTC GCGCCGTTCA CCGAGGTCGT CGTGCACGAC
CTGCGCACGC CGGAACACGC GATCCTCGCG ATCCACAACA ACCTGTCGTG CCGCGCGGTC
GGCGATCCGG CGACCGAGCT CGGGCTTGCT CGCATCGAGG ACGACGACTA CCCACAGGTG
CTCGCGAACT ACGCGAACCG CTTCGCCGAC GGCCGCACCG CGAAAAGCAC GTCGATCGGC
ATCAAGGATT CGAGCGGCCG CTACGTGGCC GCGCTGTGCC TGAACGCGGA CGTCACGCTG
TTCCGCGGCT TCCAGGGCAT GCTGAACCAG TTCTGCAGCA CCGAAGGCGA ACCCGTCGCA
GAAACGCTCG ACCCGGCCGG CGCGGACGCG ATCCGGCAGC GCATCGACGC GTTCGCGACC
CGCCTGGCGA CCACGCCGCG CGAACTGAAA ACCGACCAGC GCCGCGAGCT GATGCACGCG
CTGAAGGCGG ACGGCTTCCT CGAGGTGCGC CGCGCGATGG AAATCGTGTC GCAGCACCTC
GGCGTGTCGC GCGCCACCGT CTACAACGAT GCGAAATGA
 
Protein sequence
MTTPRPRPQL EQASLIEQVL RIAEGLGAMF APFTEVVVHD LRTPEHAILA IHNNLSCRAV 
GDPATELGLA RIEDDDYPQV LANYANRFAD GRTAKSTSIG IKDSSGRYVA ALCLNADVTL
FRGFQGMLNQ FCSTEGEPVA ETLDPAGADA IRQRIDAFAT RLATTPRELK TDQRRELMHA
LKADGFLEVR RAMEIVSQHL GVSRATVYND AK