| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4323 |
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| Symbol | |
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| ID | 6180644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1398170 |
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| End bp | 1399954 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684090 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001811001 |
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| Protein GI | 172063350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CGACCCATCT CGGCGGCGCA CTGCCGCCGC TTCCTTCGTC CCGCGTCCGC
GACGCCGGCA CGCGCCTGCG CATCGTGCCG GCCCGCCACC GCTCGCGCAC GGCCGGCACC
GTGCTCGCGC TCGTGCTGAT TGCGCTCGCG CTGCATTCGA TCCTCGGCAA CCCGCAATGG
GGCTGGCCGG TTTTCGCCGA ATGGTTTCTG TCGCCGCCGG TGCTGTCCGG GCTCGCGCGC
ACGCTGCTGC TGACGCTGCT CGGCGCGGTA TTCGGCTTCG CGCTCGGCGC GTTCGTCGCG
CTGGCGCGGC TGTCGCGTTC GCGCCTGCTC GCCGCGAGCG CGTGGACCTT CGTGTGGCTG
TTCCGGTCGA TTCCGCTGAT CGTGCTGTTG CTGATCCTCA ACAACCTCGG CTACCTGTAC
GAACACGTGC GGCTCGGCGT GCCGTTCACC GACATCGTGT GGTTCGACAC GCCGACCACC
GACCTGATCA GCCCGTTCCT CGCGGCCGTG CTCGGCCTCA CGCTGAACCA CGCGGCGTTT
TCCGCCGAGG TGATCCGCGG CGGCATTCTC GCGGTCGACC AGGGGCAGCT CGAAGCCGCC
GCGGCGCTCG GCCTGCCGCG CGGTCGCCAG ACCACGCGGA TCGTGCTGCC GCAGGCGATG
CGCGCGATCC TGCCGACCGC GTTCAACGAT CTCATCTCGC TCGCGAAAGG CACGTCGATG
GTGTACGTGC TCGCGATGCC CGAGCTGTTC TATACGGTGC AGGTGATCTA TCGCCGCAAT
CTCGAAGTGA TACCGCTGCT GATGGTCGCG ACCGTCTGGT ACCTGATCAT CCTGACCGTG
CTGTCGACGA TCCAGGTTCA GGTCGAGCGC CACTATGCGC GCGGCGCGCT GCGCAACCCG
CCGCCGTCGG CGCTGACGTT CGTGCTGGCG CGAGTCGGTG CGCTGTGGCG GCGTGCCGCG
GCACGCCATG CGACCGTCGC AACAACGGCA CGCGGCGACG CCGCGGCAGC GCCGCTGCCG
AGCGCAGGCG GCGAAGTCGC CGTGCACAAC GTGTCGAAGC AGTTCGGCAT GCAGCGCGTG
CTCGACAACG TGTCGTTCGT CGCGCCGCGC GGCAGCGTGA CGGCGATCAT CGGGCCGTCC
GGGTCGGGCA AGTCGACGCT GCTGCGCACG ATCAACCATC TCGAACGCGT CGACGACGGC
TTCATCGACA TCGACGGCGA GCTGATCGGC TATCGGCGCG ACGGCGACGT GCTGCACGAG
CTGAAGGAAC GCGACGTGCT GAAGCGGCGC ACGGCGGTCG GCATGGTGTT CCAGAACTTC
AATCTGTTTC CGCACTTGAC CGTGCTCGAG AACCTGGTGG AAGCGCCCGT CGCCGTCGCG
GGCGTCACGC GCGAGGCCGC CGAGCGCACC GCGCGCACGC TGCTCGCGCG CGTCGGCCTC
GCGGATAAAG CCGATGCCTA CCCGCGCCAG TTGTCCGGCG GCCAGCAGCA GCGCGTCGCG
ATCGCGCGGG CGCTCGCATT GCGTCCGAAG GTGCTGCTGT TCGACGAGCC GACGTCGGCG
CTCGATCCCG AACTGGTCAA CGAAGTGCTC GACGTGATCA AGGAACTCGC ACGCTCGGGC
ACCACGCTCG TGATCGTCAC GCACGAGATC GGCTTCGCGC GCGAAGTCGC GGACAACGTG
CTGTTCATGG AGCGCGGCCG CGTGGTCGAG TCGGGGCCGC CCGCCGTCGT GCTCGACGCG
CCGGCTCATC CGCGCACACG CGCGTTCCTG TCGCGGGTGC TGTGA
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| Protein sequence | MSDTTHLGGA LPPLPSSRVR DAGTRLRIVP ARHRSRTAGT VLALVLIALA LHSILGNPQW
GWPVFAEWFL SPPVLSGLAR TLLLTLLGAV FGFALGAFVA LARLSRSRLL AASAWTFVWL
FRSIPLIVLL LILNNLGYLY EHVRLGVPFT DIVWFDTPTT DLISPFLAAV LGLTLNHAAF
SAEVIRGGIL AVDQGQLEAA AALGLPRGRQ TTRIVLPQAM RAILPTAFND LISLAKGTSM
VYVLAMPELF YTVQVIYRRN LEVIPLLMVA TVWYLIILTV LSTIQVQVER HYARGALRNP
PPSALTFVLA RVGALWRRAA ARHATVATTA RGDAAAAPLP SAGGEVAVHN VSKQFGMQRV
LDNVSFVAPR GSVTAIIGPS GSGKSTLLRT INHLERVDDG FIDIDGELIG YRRDGDVLHE
LKERDVLKRR TAVGMVFQNF NLFPHLTVLE NLVEAPVAVA GVTREAAERT ARTLLARVGL
ADKADAYPRQ LSGGQQQRVA IARALALRPK VLLFDEPTSA LDPELVNEVL DVIKELARSG
TTLVIVTHEI GFAREVADNV LFMERGRVVE SGPPAVVLDA PAHPRTRAFL SRVL
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