| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4300 |
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| Symbol | |
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| ID | 6179906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1358621 |
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| End bp | 1360027 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641684068 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001810979 |
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| Protein GI | 172063328 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGC GGGAGCTGGA TCGTTTAAAG GTCGTAGAAG CCGTGATCGA GCAGCGTCTG
ATGCCTTGGC GAGCCGCAGA GCGGCTTGGG ATCAGTCGAC GACAGATTGA ACGGCTGGTC
GCCCGGTATC GTGCAGCTGG CCCGGCCGGG CTGCTTTCGC AGCGCCGTGG TCACGCGAGC
AACCATCAAC TGCCCGAGGA TTTGGCACAT CGTGCCTTGA GCCTGATTCG GGAGCGCTAC
GCCGATTTTG GGCCGACGCT GGCCTGCGAG AAGCTTTGGG AATGCCACGG GCTGGAGTTG
TCGAAGGAAA CGGTCAGGAA GCTGATGACA GACGCTGGGC TCTGGATTCT GCGCCGACAA
CGACCGCCCA AGGTCTACCA GCCCCGAGCA CGGCGCGCCT GCCTGGGCGA GCTGATCCAG
ATCGACGGCA GCGATCATCG GTGGTTCGAG GAACGGGCGC CGGCCTGCAC GCTGCTGGTG
TACGTGGACG ACGCGACGAG CCGGCTGATG CATCTGCACT TTACGGCAAC GGAATCGACC
TTCAGCTACT TCGAGGCCAC GCGGGCGTAT ATCGAACGCC ATGGCAAGCC GGTGGCGTTC
TACAGTGACA AGTACAGTGT GTTTCGCAGC ACGAACGCCG GCAAAACCGG CAGCAGCGTG
ACTCACTTCG GCCGAGCCAT GTACGAACTG AACATCGACA CGTTCTGTGC GAACAGCAGT
TCGGCCAAGG GACGTGTCGA GCGTGCGCAC CTGACGCTGC AGGACCGGCT CGTCAAGGAG
TTGAGGTTGC GCGGCATCAG CACGGTAGCC GATGCCAACG CTTATGCGCC CTCCTTCATC
GCCATGTATA ACGCGCGCTT CGCGAAGCCG CCACGCAGCG ACTTCAATGC GCACCGACCA
TTGCGGGACG ACGAGGATCT GGATCGGCTG CTGACCTGGC GCGAAACGCG CCGCGTATCG
AAGTCGCTGA CGGTGCTGTA CGACCGGGTG CTCTACCTGC TGAACGATAC GCCGGCTAAC
CGCAAGCTGA TTCACCGGTA CATCGACGTG TTGGAGTACC CGGATGGGCG GATCGAAATC
CGGGCTAATG GCGAGGTACT GACTTGCCGT CTTTACGACA AGCTGGCAGA GGTCGATCAA
GGCGCGATCA TCGAACACAA GCGCCTGAGT CACGCGCTGC AGGTGGCTGA AGCAATCCAG
GCGCAGCGCG ACAACCGACG GATCTCGGGT TCGCCGTCGC GCGCCAATCG AGGGCTACCG
GTGCGGGCGA AGGGATCGTT GCCAGGTGCC AAGAAGCAGC GTGCCTTCAC GGAAGCCGAC
ATCGAAGCAG CCATCCTGCA GGTCGCTTTG CAAACACATC AAGCGGAATC GAATCGGCGG
TCTGCCAAGG CCCGCGGGGG AACGTAA
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| Protein sequence | MSMRELDRLK VVEAVIEQRL MPWRAAERLG ISRRQIERLV ARYRAAGPAG LLSQRRGHAS
NHQLPEDLAH RALSLIRERY ADFGPTLACE KLWECHGLEL SKETVRKLMT DAGLWILRRQ
RPPKVYQPRA RRACLGELIQ IDGSDHRWFE ERAPACTLLV YVDDATSRLM HLHFTATEST
FSYFEATRAY IERHGKPVAF YSDKYSVFRS TNAGKTGSSV THFGRAMYEL NIDTFCANSS
SAKGRVERAH LTLQDRLVKE LRLRGISTVA DANAYAPSFI AMYNARFAKP PRSDFNAHRP
LRDDEDLDRL LTWRETRRVS KSLTVLYDRV LYLLNDTPAN RKLIHRYIDV LEYPDGRIEI
RANGEVLTCR LYDKLAEVDQ GAIIEHKRLS HALQVAEAIQ AQRDNRRISG SPSRANRGLP
VRAKGSLPGA KKQRAFTEAD IEAAILQVAL QTHQAESNRR SAKARGGT
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