| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4293 |
|---|
| Symbol | |
|---|
| ID | 6179700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1349825 |
|---|
| End bp | 1350883 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641684061 |
|---|
| Product | alcohol dehydrogenase |
|---|
| Protein accession | YP_001810972 |
|---|
| Protein GI | 172063321 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAA CCAAGACAGC AAACCGCAGA ATCGTCCTGA ACGCGCGTCC GGTCGGCGCA
CCCACCCCAA ACGACTTTCG CACCGAGACC GCTGACGTGC CGGTGCCCGG CGCCGGACAG
GTGCTGTTGC GCACGGTGTG GCTGTCGCTC GATCCGTACA TGCGCGGCCG CATGAGCGAC
GCGCCGTCGT ATGCGCCGCC GGTCGGACTC GGCGACGTGA TGGTCGGCGG CACGATCAGC
CGCGTCGTCG CATCGAACCT GCCCGCGTAT CGCGAAGGCG ACCTGGTCGT CGCGGGCGGT
GGCTGGCAGG ACTACGCGTT GTCCGACGGC AGCGATCTCA TTGCGCTCGG CCGCGACTTC
GCGCATCCGT CGTATGCACT CGGCGTGCTC GGCATGCCGG GGTTCACCGC GTACACCGGA
TTGCTGAAGA TCGGCGAGCC GAAGGCCGGC GAAACCGTGG TCGTCGCCGC CGCGAGCGGG
GCGGTCGGAT CGGTGGTCGG CCAGATCGCG AAGCTGAAGG GCTGCCGCGT GGTTGGCGTC
GCGGGCGGCG CCGACAAGGT CGCGTACGTG AAGGACACGC TCGGCTTCGA CGCCTGCATC
GATCATCGCG ATCCGCAGTT CGCGGCCAAG CTGAAGGAAG CCTGCCCGAA CGGCATCGAC
GTCTATTTCG AGAACGTCGG CGGCGCCGTG TTCGACGCGG TGTGGCCGCT GCTCAACGAT
CATGCGCGCG TGCCGGTGTG CGGCATCATC GCGCATTACA ACGACGCGGC GTACGACGAC
ACCGCGGTGT CGAGCGGCCG TGACCGCGTG CCGGCACTGA TGGGGACCAT CCTGCGCAAG
CGCATCCGGA TGCAGGGTTT CATCATTCTC GATCATTATG CGACGGGCTA TGCGCCGTTC
CTGAAGGAGA TGAGCGAGTG GGTCGCGCAG GGCAAGGTGA AGACGCTCGA GGACGTGATC
CCCGATCTCG CCGATGCGCC GAACGCGCTG ATCGGCTTGC TCGCCGGCAA GAACTTCGGC
AAGGTCGTCG TGCGCGTCGG CCCGGACGAA CTGGCATGA
|
|---|
| Protein sequence | MPQTKTANRR IVLNARPVGA PTPNDFRTET ADVPVPGAGQ VLLRTVWLSL DPYMRGRMSD
APSYAPPVGL GDVMVGGTIS RVVASNLPAY REGDLVVAGG GWQDYALSDG SDLIALGRDF
AHPSYALGVL GMPGFTAYTG LLKIGEPKAG ETVVVAAASG AVGSVVGQIA KLKGCRVVGV
AGGADKVAYV KDTLGFDACI DHRDPQFAAK LKEACPNGID VYFENVGGAV FDAVWPLLND
HARVPVCGII AHYNDAAYDD TAVSSGRDRV PALMGTILRK RIRMQGFIIL DHYATGYAPF
LKEMSEWVAQ GKVKTLEDVI PDLADAPNAL IGLLAGKNFG KVVVRVGPDE LA
|
|---|
| |