Gene BamMC406_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4287 
Symbol 
ID6179707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1343663 
End bp1344409 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID641684055 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001810966 
Protein GI172063315 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.250358 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.289691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCTG ATCGTGTCGC ATTCGTCACG GGCGGCATGG GCGGCCTCGG GGCCGCGATC 
AGCCGTCGCC TGCACGAGGC CGGGATGACG GTGGCGGTAT CGCACACGGA AGGCAACGAC
CACGTCGCGA CGTGGCTCAC GCACGAACGC GAAGCGGGGC GCACGTTCCA TGCGTTCGAG
GTCGACATCG CCGACTACGA TTCGTGCCAG CAGTGCGCGG CACGCGTGCT CGCCGAATTC
GGGCACGTCG ACGTGCTCGT CAACAACGCC GGCGTCACGC ACGATGCCAC CTTCGTGAAG
ATGACCAAGA GCATGTGGGA TGCGGTGCTG CGCACCAATC TCGACGGCAT CTTCAACATG
ACGAAGCCAT TCGTGCCGGG CATGATCGCA GCCGGTTTCG GGCGCATCGT GAACATCGGC
TCGGTGAACG GTTCGCGCGG CGCATACGGG CAGGCCAACT ACGCGGCCGC GAAGGCCGGG
ATCCATGGCT TCACGAAGGC GCTGGCGCTC GAGCTCGCGC ACCACGGTGT GACGGTCAAC
ACGGTCGCAC CCGGTTACCT GGCGACCGCG ATGCTCGAGT CGGTGCCGAA AGAGGTGCTC
GATACGAAGA TCCTGCCGCA GATTCCGGTC GGCCGCCTCG GCGATCCCGA CGAAATCGCG
GCGCTCGTCG CCTTCCTGTG TTCCGACGCA GGGGCGTTCG CGACCGGCGC GGAATTCGAC
GTCAATGGCG GGATGCACAT GCGTTGA
 
Protein sequence
MCADRVAFVT GGMGGLGAAI SRRLHEAGMT VAVSHTEGND HVATWLTHER EAGRTFHAFE 
VDIADYDSCQ QCAARVLAEF GHVDVLVNNA GVTHDATFVK MTKSMWDAVL RTNLDGIFNM
TKPFVPGMIA AGFGRIVNIG SVNGSRGAYG QANYAAAKAG IHGFTKALAL ELAHHGVTVN
TVAPGYLATA MLESVPKEVL DTKILPQIPV GRLGDPDEIA ALVAFLCSDA GAFATGAEFD
VNGGMHMR