Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4287 |
Symbol | |
ID | 6179707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1343663 |
End bp | 1344409 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684055 |
Product | acetoacetyl-CoA reductase |
Protein accession | YP_001810966 |
Protein GI | 172063315 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.250358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.289691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCGCTG ATCGTGTCGC ATTCGTCACG GGCGGCATGG GCGGCCTCGG GGCCGCGATC AGCCGTCGCC TGCACGAGGC CGGGATGACG GTGGCGGTAT CGCACACGGA AGGCAACGAC CACGTCGCGA CGTGGCTCAC GCACGAACGC GAAGCGGGGC GCACGTTCCA TGCGTTCGAG GTCGACATCG CCGACTACGA TTCGTGCCAG CAGTGCGCGG CACGCGTGCT CGCCGAATTC GGGCACGTCG ACGTGCTCGT CAACAACGCC GGCGTCACGC ACGATGCCAC CTTCGTGAAG ATGACCAAGA GCATGTGGGA TGCGGTGCTG CGCACCAATC TCGACGGCAT CTTCAACATG ACGAAGCCAT TCGTGCCGGG CATGATCGCA GCCGGTTTCG GGCGCATCGT GAACATCGGC TCGGTGAACG GTTCGCGCGG CGCATACGGG CAGGCCAACT ACGCGGCCGC GAAGGCCGGG ATCCATGGCT TCACGAAGGC GCTGGCGCTC GAGCTCGCGC ACCACGGTGT GACGGTCAAC ACGGTCGCAC CCGGTTACCT GGCGACCGCG ATGCTCGAGT CGGTGCCGAA AGAGGTGCTC GATACGAAGA TCCTGCCGCA GATTCCGGTC GGCCGCCTCG GCGATCCCGA CGAAATCGCG GCGCTCGTCG CCTTCCTGTG TTCCGACGCA GGGGCGTTCG CGACCGGCGC GGAATTCGAC GTCAATGGCG GGATGCACAT GCGTTGA
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Protein sequence | MCADRVAFVT GGMGGLGAAI SRRLHEAGMT VAVSHTEGND HVATWLTHER EAGRTFHAFE VDIADYDSCQ QCAARVLAEF GHVDVLVNNA GVTHDATFVK MTKSMWDAVL RTNLDGIFNM TKPFVPGMIA AGFGRIVNIG SVNGSRGAYG QANYAAAKAG IHGFTKALAL ELAHHGVTVN TVAPGYLATA MLESVPKEVL DTKILPQIPV GRLGDPDEIA ALVAFLCSDA GAFATGAEFD VNGGMHMR
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