| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4275 |
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| Symbol | |
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| ID | 6179814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1333544 |
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| End bp | 1334878 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684044 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001810955 |
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| Protein GI | 172063304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.221231 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGCC GCCCCCGCCA CGACCGCCTC GACCTGTGGA TGAACGGCAT CCCGGTCGGA
TACTGGGAAG TCCGGCGCGG CGTTGAGCGC CTCGTCTACC TGCCGGCGTG GATCGACGAT
CCGCAGGGGC GTCCGCTGTC GCTGTCGCTG CCGTTCACGC CCGGCAACCA GCCGCACCAG
GGCGCGATCG TCGCCGACTA CTTCGACAAT CTGCTGCCGG ACAGCCAGCC GATCCGCCGC
CGCATCGCGC AGCGCTACCG GCTCGGCTCG ACGGCGCCGT TCGAACTGCT CGCGTCGATC
GGCCGCGATT GCGTCGGTGC GCTGCAACTG CTGCCGCCCG ACGAGACGCC GGTCGACCTG
CAGGCGATCG ACGGCACCGC GCTCGACGAC GCAGCCGTCG CCGACGTGCT GCGCCACGCA
ACCGCCGCGC CGCTGCCCGG CCATGCGGAA CCGGACGGCG AATTGCGTCT GTCGATCGCC
GGCGCGCAGG AAAAGACCGC GCTGCTGCGC CACGGCAACC GCTGGCTGCT GCCGGCGGGC
AGCACGCCCA CCACGCATAT CTTCAAGCTG CCGCTGGGAC GCGTCGGGAA CATGCAGGCC
GACATGCGCA CGTCGGTCGA GAACGAATGG CTGTGCTCGA AGATCGTCGC CGCATACGGG
CTGCCGGTGG CCGCGTGCGA CATCGGCCGG TTCGACGACC AGAAGGCGCT GATCGTCGAG
CGCTTCGACC GCCGCCCGTC GCGCGACGGC ACGTGGATCC TGCGGCTGCC GCAGGAGGAC
ATGTGCCAGG CGACCGGCAC GCCGTCGGGC GCGAAATACG AATCCGACGG CGGCCCGGGC
ATCGCGACGA TCATGGGCAT CCTCGCGAAT TCCGCCGAGG CCGCGCAGGA CCGGAACAAC
TTCTTCGTCA CGCAGCTCGT GTTCTGGGTA CTCGCAGCCA TCGACGGCCA TGCGAAGAAT
TTCAGCATCG CGCATCTGCC CGGCAACACG TATCGGAGCA CGCCGCTGTA CGACGTGCTG
TCCGCGCATC CGATCATCGG CACGCGACGC AACCAGCTGC CGCCGCGACG CGCGCGGCTG
GCCATGGCCG TATGCGGGAA GAATCGCCAT TACGTGATCG CCGACATCCA GCCGCGCCAC
TGGATCGCGC AAGGCGCGCG TGTCGGTCTG ACCGAAGACG AAGTCCGCGC GGCGATGGCC
GGCGTGGCCG CCCGCACCGA ACCGGCGATC GCCGACGTCG CGTCGCGCAT TCCCGCGGAC
TTCCCGGCAG ACGTGGCCGA TGCGATCTTC GACGGGATGC GCCGCCAGGC GCGCAAGCTC
GGCGCGGCCG ACTAG
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| Protein sequence | MARRPRHDRL DLWMNGIPVG YWEVRRGVER LVYLPAWIDD PQGRPLSLSL PFTPGNQPHQ
GAIVADYFDN LLPDSQPIRR RIAQRYRLGS TAPFELLASI GRDCVGALQL LPPDETPVDL
QAIDGTALDD AAVADVLRHA TAAPLPGHAE PDGELRLSIA GAQEKTALLR HGNRWLLPAG
STPTTHIFKL PLGRVGNMQA DMRTSVENEW LCSKIVAAYG LPVAACDIGR FDDQKALIVE
RFDRRPSRDG TWILRLPQED MCQATGTPSG AKYESDGGPG IATIMGILAN SAEAAQDRNN
FFVTQLVFWV LAAIDGHAKN FSIAHLPGNT YRSTPLYDVL SAHPIIGTRR NQLPPRRARL
AMAVCGKNRH YVIADIQPRH WIAQGARVGL TEDEVRAAMA GVAARTEPAI ADVASRIPAD
FPADVADAIF DGMRRQARKL GAAD
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