| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4274 |
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| Symbol | |
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| ID | 6179813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1332268 |
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| End bp | 1333395 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684043 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_001810954 |
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| Protein GI | 172063303 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.217947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCA ATCCCCACCC CCTGTCCAGC GATACGCCGC CCGTCGCCGA TCCGGCCGCC
AATCCGCTCG GGATGGCCGG ACTCGAATTC GTCGAATTCG CGGCGCCGGT GCCGGACGCG
CTCGCGCAAC GCTTCGAGCA GCTCGGGTTC AAGGCGATCG CGCGCCATGT GAGCAAGAAC
GTCACGCTGT ACCGGCAAGG GCAGATGCAA TTCCTGATCA ACGCCGAGCC CGAATCGTTC
GCGGCGCGCT ATGCGGAGGA ATACGGGATG GGCGTCTGCG CGATCGGGCT GCGCGTGGCG
AGCGCGCGGC GCGCGTTCGA GCGGGCGATC GAACTGGGCG CGTGGGCGTT CGAGGGCGAG
CGGATCGGCG TCGGCGAGCT GAAGATTCCC GCGATCCAGG GCATCGGCGA TTCGCATCTC
TATTTCGTCG ACCGCTGGCG CGGGCGGGAT GGCCAGCGCG GCGGCGTCGG CGACATCTCG
ATTTTCGACA TCGATTTCCG GCCGATCGAC ATCGCGACCG CCCATACCGA TCACGATTGC
GTGGGCACGG GCCTGCAGCA AGTCGACCAC TTCACGCAGA CGGTCGGCGC GGGGCGCATG
CGCGAATGGC TCGACTTCTA CCATGACCTG CTGCACTTCC GCGAAATCCA TGAAATCGAT
GCGCACTGGC ATGTATCGGA AGAATCGCGC GTGATGGTGT CGCCGTGCGG CGCGGTGCGG
ATTCCCGTGT ACGAGGAAGG CACGCGGCGC ACCGAGCTGA TGCACGCGTA TCTGCCGGAC
CATCCCGGCG AAGGCGTCCA GCACGTTGCG CTGTCGACCG ACGACATCCT GGCGAGCGTC
GATGCGCTGC GCGCGAACGG CGTCGAATTC ATCGAGCCGC CGGCGCGCTA TTACGACGAA
GTCGATGCGC GGCTGCCCGG GCACGGCGTC GATCTCGACG CGCTGCGCCG CCGCGCGGTG
CTGGTCGACG GCGAAATCGG CAGCGATGGC GTGCCGCGGC TGTTCTTCCA GACCTTCGTC
AAGCGCCGGC CCGGCGAGAT CTTCTTCGAG ATCGTGCAGC GGCAAGGGCA CCACGGATTC
GGGGAAGGGA ACCTCGCGGC GCTGGCCCGC GCCCGCGACG CGGGCTGA
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| Protein sequence | MPGNPHPLSS DTPPVADPAA NPLGMAGLEF VEFAAPVPDA LAQRFEQLGF KAIARHVSKN
VTLYRQGQMQ FLINAEPESF AARYAEEYGM GVCAIGLRVA SARRAFERAI ELGAWAFEGE
RIGVGELKIP AIQGIGDSHL YFVDRWRGRD GQRGGVGDIS IFDIDFRPID IATAHTDHDC
VGTGLQQVDH FTQTVGAGRM REWLDFYHDL LHFREIHEID AHWHVSEESR VMVSPCGAVR
IPVYEEGTRR TELMHAYLPD HPGEGVQHVA LSTDDILASV DALRANGVEF IEPPARYYDE
VDARLPGHGV DLDALRRRAV LVDGEIGSDG VPRLFFQTFV KRRPGEIFFE IVQRQGHHGF
GEGNLAALAR ARDAG
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