| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4269 |
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| Symbol | |
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| ID | 6179993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1327319 |
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| End bp | 1328089 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684038 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001810949 |
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| Protein GI | 172063298 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0275811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.187391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CGGACCTCGA CCGACGCGAC TGGATCGCCG GCCTCGAAAA AGGCCTGGCG
ATCCTGGAAG CGTTCGACAG CCAGCACGCG CGGATGACGC CAACCCAGGC CGCCGCCCGC
ACCGGGCTCA CGCGCACGGC CGCGCGGCGC TACCTGCTGA CGCTCGAATC GCTCGGCTAC
GTGTACACCG ATGGCAAGCT GTACGGCCTC ACGCCGCGCG TGCTGCGGGT CGGCTGGTCG
TACTTCGATT CGGCGCGGCT GCCGCGCACG GTCCAGCCCT ATCTGCAGCA ACTGAGCGCG
TCGCTGAACG AGTCGGCGTA CGTGAGCGTG CTCGATGGCT GGGAACTCGT GTTCATTGCC
CGCAACGGCG TGTCGCGCGT GATGACGACC GGCTTCGTGC TCGGCGCACG GGTGCCGGCG
CCGCTGACGT CGCCCGGAGT GGTGCTGCTT GCGCATCATC CGGATCGGGA GGCCGTCCGC
GCGTGGCTCG CCGACGCCGA ACTCGCGCCG TTCACGCCGC ACACGATCAC CAACAAGGCA
CGACTGCTCG AACAGGTCGA CCACGCGCGC GACGCGGGCT TCGCGGTCAT CGAGCAGCAA
CTGCAGGTCG GCGTGCGCGG CGTCGCGGTG CCGTTGAAGA ACCGTCACGG CGAAGTCGTC
GCCGCGCTGA GCACGAACAT GCCGATCGGC ACGGAATCAA CGGATGCGGC CGTGCGGCGC
GTGCTGCCGC ATCTGCAGGA AGCCGCGCTC GCGATGCTCA ACGTGCTGTA G
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| Protein sequence | MKKTDLDRRD WIAGLEKGLA ILEAFDSQHA RMTPTQAAAR TGLTRTAARR YLLTLESLGY
VYTDGKLYGL TPRVLRVGWS YFDSARLPRT VQPYLQQLSA SLNESAYVSV LDGWELVFIA
RNGVSRVMTT GFVLGARVPA PLTSPGVVLL AHHPDREAVR AWLADAELAP FTPHTITNKA
RLLEQVDHAR DAGFAVIEQQ LQVGVRGVAV PLKNRHGEVV AALSTNMPIG TESTDAAVRR
VLPHLQEAAL AMLNVL
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