| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4267 |
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| Symbol | |
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| ID | 6179991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1323252 |
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| End bp | 1324982 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684036 |
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| Product | VRR-NUC domain-containing protein |
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| Protein accession | YP_001810947 |
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| Protein GI | 172063296 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0413934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.150321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGTA CCTGTACAAA CGTACAGTTA TCGACCCCCG TGACGCCTGC ATCGACGCCT
CCGGCGTTTT ACTACCTGAC CAATTTCGAA CGCGCGCTGG CCTGGCTCGG CGAGCGTTAC
GACGACCTCC TCGACGCGCA CGAACACGCG TTTCTCCGGC AGTTCGCGCA ACTGCCGAAG
GCGTCGCGCG CGTTGCTCGT GCGGATGCTG ATGCGCAGCG GATCCGACTT CCGGGCGAGC
AAGCTCGTGT ACGACGAAAT CGGCAGCACG CTCGACGCAG CGGCGCCGCT CGTCGCACTC
GGCTGGATCG ATCCGGCGCC CGCGCTCACG CTCGACGAGC TGTTCGCGCT GTCGACCAAG
GCCGATCTAC TGAAGGCGTT CCCGTCGCTC GCCGCGCACG CGGGCGAGCG CAAGCCCGAC
TGGCTCGAGC GGCTGCGGCT CGTGCACGAC GTCGCGCAGC CGCTCGACGC GTGGTGCGCG
CAGGCCGACG ACTGCGTGCT GCGCGTGACG GTCGGCGCGC TATGCGACCG GCTGCGGCTG
ATGTTCTTCG GCAATCTTCA TCAGGACTGG AGCGAATTCG TGCTCGCCGA TCTCGGCGTG
TTCCAGTACG AAAGCGTGCC GTTCGCGCCG TCCTCGCGTG CGTTCCAGCA GCGCGCCGAC
GTCGATGCGT ATCTCGCGCT GCAGACCTGC CGCGAAGCCC TCGACGCATG GCCGGCGGAC
CTCCCCTTCG ACGACCTGCT GCACGCGATC GAAGCGGTCG GCTGCGCGCA GCCGTGGCTT
GCGACCCGCC GCTCGAAGCT GCTGTTCTCG CTCGGGCAAG CGTGCGAGCG GCGCGCCAAC
TGGGACGCGG CGCTCGACGC GTATGCGCGC AGCGCGTGGC CGGGCAGCCG GCATCGGCGC
ATTCGCGTGC TCGAGCGCTG CGGACGCGAT GACGACGCAC TCGCGCTGGC GCTCGACGCG
CGCGGCGGTT TCGAAAGCGA CGAGGAACGT CAGCGCGTCG AGCGGATGCT GCCGCGCCTG
CAGCGGCGTC TCGGGCAGCG GGTCGACCGC GCGGGCCGCG CGCACGACGT GCCGCGCGAA
ACACTCGTGC TCGCGCGTCC CGAAGCGTTC GTCAGCGTCG AATTCGCGGT GCGCGACCAT
CTGGCGCAGC CCCACGCGCC GGTTCATTAC GTCGAGAACA CGCTGATCAA TTCGCTGTTC
GGGCTGCTGT GCTGGGAGCC CGTGTTCGCG GCCGTGCCCG GCGCGTTCTT TCACCCGTTC
CAGCGCGGCC CGGCCGACCT GCACGCGCCC GATTTCGCGG TGCGCCGCAC GGACGCGTTC
GCCGCCTGTT TCGCGCAGCT CGACTCGGGC GCGTACCGCG ACACGATCCG CCGGCATCAT
GCGACGAAAA CAGGGCTGCA ATCGCCGTTC GTGTTCTGGG GCGTGCTGAC CGACGAACTG
CTCGACGAGG CCCTGGCCTG CCTGCCGCCC GAGCACCTGC GGTTGTGGTT CACGCGCCTG
CTCGCGGACA TCCGCAGCAA CCGTTCGGGG CTGCCCGACC TCGTGCGTTT CTGGCCCGGC
GAACGGCGCT ACGAGCTGAT CGAGGTGAAG GGCCCCGGCG ACCGCCTGCA GGACAACCAG
ACGCGCTGGC TCGCGTACTG CGTCGCGCAC GGCATTCCGG TGCGTGTCGT CGATGTCGAA
TGGGCGGGCG CCGACGTCAC GCAGGCCGAG GCAGCGGGGC TGTCCGCATG A
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| Protein sequence | MIGTCTNVQL STPVTPASTP PAFYYLTNFE RALAWLGERY DDLLDAHEHA FLRQFAQLPK
ASRALLVRML MRSGSDFRAS KLVYDEIGST LDAAAPLVAL GWIDPAPALT LDELFALSTK
ADLLKAFPSL AAHAGERKPD WLERLRLVHD VAQPLDAWCA QADDCVLRVT VGALCDRLRL
MFFGNLHQDW SEFVLADLGV FQYESVPFAP SSRAFQQRAD VDAYLALQTC REALDAWPAD
LPFDDLLHAI EAVGCAQPWL ATRRSKLLFS LGQACERRAN WDAALDAYAR SAWPGSRHRR
IRVLERCGRD DDALALALDA RGGFESDEER QRVERMLPRL QRRLGQRVDR AGRAHDVPRE
TLVLARPEAF VSVEFAVRDH LAQPHAPVHY VENTLINSLF GLLCWEPVFA AVPGAFFHPF
QRGPADLHAP DFAVRRTDAF AACFAQLDSG AYRDTIRRHH ATKTGLQSPF VFWGVLTDEL
LDEALACLPP EHLRLWFTRL LADIRSNRSG LPDLVRFWPG ERRYELIEVK GPGDRLQDNQ
TRWLAYCVAH GIPVRVVDVE WAGADVTQAE AAGLSA
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