| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4257 |
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| Symbol | |
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| ID | 6181132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1315426 |
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| End bp | 1316583 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684026 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001810937 |
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| Protein GI | 172063286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.549795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCA AGGTTGCCAC ATGCCGGCAT CGCGATGCTG CAATCACCTA TTTCTTCCGG
TATCGCACCG GACATTGGAA ATTTCTATGT CGCGGCACCT TTTGGTCCGT TCCGCTGTCG
ATGATAAATA TTGCAACGAG GGAAACGGGC AATGCCGATT TTCAAAGCGG CCCGCTGACG
CCTATGGCTG AAACCGCAAA CCGTCCGAAG CAACGCGCCG ATGCACGCCA GCTGTCCGGC
CGCTCCGCGG CGATGCGCAC GTTGCTCGAC CGTATCGAGA AAATCGCGCC GACCCGCGCG
AGCGTGATGA TTGCCGGCGA AAGCGGGGTC GGCAAGGACA TCGTCGCGCG GCGGCTGCAC
GACCTGAGCG CGCGCCGCGA CGGGCCGTTC GTGCCCGTCA ACTGCGGCGC GATTCCGGCC
GACATCGCCG AAGCGCAATT GTTCGGCCAC GAGAAAGGGA GTTTCACCGG CGCGATCGCG
CAGCGCGAGG GGTTCTTCGA AGCCGCGTGC GGCGGCACGC TGCTCCTCGA CGAGATCGCG
GAAATGCCTG CGGCGCTGCA GGTGAAGCTG CTGCGGGCGC TCGAATCGAA CACGATCGTG
CGCGTCGGCG GCACCGAGTC GATTCCGCTC GACGTACGCA TCGTGTCGGC GACCCGCCAC
AATCCGGCCG ATGCCGTCCG GGACGGCCGG CTGCGCGAAG ATCTGTTCTA CCGGCTCGCC
GCGTTTGCGC TGTACGTGCC GCCGCTGCGC CAGCGCAACG GCGACGTCGA GGCGATCGCA
CACGAGTTCG TCGACGCGCT CAACGAGCGG CACCGCTCGC ACAAGCGGCT GACCGACGCC
GCGATCGCCG CGCTGCGCGC GTATTCATGG CCCGGCAACG TGCGCGAGCT GCACAACACG
ATCGAGCGCG CATACATCCT CGCGGACGAC GGCATCGACG TCGCGCTGCC GCAGCCGACG
CTGCTGCCCG ACCAAACGTC GGACGACGCA ATGGCGCTGC CGCTCGGCGC GACCCTTCAC
TACGCGCAGC AGCGCTTCAT CGCGGCCACG CTGGACCACT TCGACGGCAA CAAGCCGCAA
GCGGCGAAAG CGCTCGGCAT CAGCTTGAAG ACGCTCTACA ACCGGCTTGC GCTGATGCGC
GACGGCGGCC CCGCCTGA
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| Protein sequence | MARKVATCRH RDAAITYFFR YRTGHWKFLC RGTFWSVPLS MINIATRETG NADFQSGPLT
PMAETANRPK QRADARQLSG RSAAMRTLLD RIEKIAPTRA SVMIAGESGV GKDIVARRLH
DLSARRDGPF VPVNCGAIPA DIAEAQLFGH EKGSFTGAIA QREGFFEAAC GGTLLLDEIA
EMPAALQVKL LRALESNTIV RVGGTESIPL DVRIVSATRH NPADAVRDGR LREDLFYRLA
AFALYVPPLR QRNGDVEAIA HEFVDALNER HRSHKRLTDA AIAALRAYSW PGNVRELHNT
IERAYILADD GIDVALPQPT LLPDQTSDDA MALPLGATLH YAQQRFIAAT LDHFDGNKPQ
AAKALGISLK TLYNRLALMR DGGPA
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