| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4249 |
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| Symbol | |
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| ID | 6180784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1305304 |
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| End bp | 1307358 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684018 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001810929 |
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| Protein GI | 172063278 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.136482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGCC AGCCACTCGT GGCTGGCGTC GCTGCACTGT TCGCCGGCGC GGCGCTGTCG
CTCGGCGTCG CGCTGCTGGT GCGCGAGCAG TGGCAAGGCG CCGTGCATAC GCGCTTCGAA
CGCCGCACGT CGCACGTGAC GGCGATGCTG CGCCACGAGT TGCAGACCGG CGCCGCCGTG
CTCGAAAGCG CGCGCGGCGC GTTCCTGCTC GCGCCGCAGA TGACACCCGA GCAATGGCGC
CGGTATGCCG ACACGCTCGA GCTCGACAGC GGCCGTTCGC CGGTCCGGCA GCTCGGCTAT
GCGCCGCTGT CGCCCGCGAC ACGCAGCGCG CTCGCCGGCG ACGCGCCGCT GCCGGCCGGC
CCGTTCGCGG TCGCGACGCT CAGCGCGCCG CTGTCGAGCG CGGCCGGCGC GCGCTTCGGC
GCACCGGATC AGGCGCCGCT GGCACGCGCG CTGCGCACCG GCAATGTCGC GCTCGGCATC
CATCCGGCCG ACGACGATAC GTCCCGCGAT ACCCGCATCC TCATGCTGTT CGTGCCGGCG
ACGCCTTCAT CGCGCACGCC CGTCACGCCA GCCGGCGCCC ATGACACGGG TGTCGGCGGC
GTGCTGTTCG CGGAACTCAG CCCGAATCGC GTGGTGGAGC GCGCGCTCGA CGCGGAACGG
GGGCTCGACC TGCGGATGAG CGCCGGCGAC GATCCGCATC CGATCGCGAG CGCGGAGACG
ACGACCGACG AGGCCTCCAC GTCGCCCGAC CTGATGCGCC GCACCGACCA GCTGAATTTC
GGCGGCACCG TGCTGACGCT CGCCTATTCC GCGGACGGCC GCCCGAGCGC GACCGGCGCG
CAGCGCGCGG CGGGCACGGT GCTCGCCGCC GGGCTGATCG CGTCGTTCGC GTTCGCGGCA
CTCATCCATG CACTGCTGCG CGGCCGCGCC GGGACGGCCG ATACCGGCGC CAGCAGCCGC
GGCATCCTCA ACGAGGCGCG GATGATGGGC ATCATCCGTT CGTCGATGGA AGCGATCATC
ACGATCGACG AGAAGCAGAC GGTTGTCATC TTCAATCCGA TGGCCGAACA GGTATTCGGC
GTGTCGGCGA TGGAGGCGAT CGGCGCGCCG CTGTCGCGCT TCATCCCCGA GCGGTTTCGC
ACCGCGCATG CGAAGCATGT CGACCAGTTC GGCGTGACCG GCGTGTCCGA GCGCCAAATG
GGCCGCCAGC GCGTGCTGTT CGGGCTGCGC GGCAACGGCG AGGAATTTCC GATCGAGGCG
TCGATCTCGC AGATCCGCGA TGCATCGGGC AAGCTCTATA CGGTGATGCT GCGCGACATC
ACGGAGCGGC AGCGCGCGGA GAACGCGCTG AAGCAGTCGC GCGAGGAACT GCGCGAACTC
TCGGCGAACC TGCAGAACGT ACGCGAAGAG GAAAAGACCC GCATCGCGCG CGAACTGCAC
GACGATCTCG GCCAGCAACT GACCGCGCTG AAGATGGATC TGTCGGTGAT CGAGCAGCAA
CTGCGCGCGC CGGGCCGTGC GCAACCCAAC GACGACGTGC TGTCGCACCT GCAGGGCATG
CGCCGTCTGA TCGATGCAAC CGTCGCGTCG GTGCGGCGCA TCGCAGCCGA CCTGCGTCCG
GTGATGCTCG ACGATCTCGG CCTCGTGCCC GCGATCGAGT GGCTGGCGAA CGACTTCACG
AACCGCTACG GCATCGACGT CGAACGCCAC ATCGAAACGG GCGGGCTCAC GTTCACCAGC
GCGGGGGCGA CCACGCTGTT CCGGATCGTC CAGGAAGCGC TGACGAACGT CGCGCGCCAC
GCCGATGCGA CCCGCGTCGC GCTGCGGCTC GACATCGAGG AAGGCTTCTG CGTACTGCGC
GTCGCGGACA ACGGCCGCGG CGCGGCACCG GGCGGCAGCG CCCACGAGGA TAAATCGTTC
GGGCTGATCG GCATTCGCGA ACGCGCACAC ATGCTGGGCG GCAACGTGAC GATCGACACC
GCGCTCGCGC GCGGCTTCTC GATCACCGTC GCCTTCCCGC TCGGCACAGT TCACCAGGAA
ACCACCCTCA CATGA
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| Protein sequence | MLRQPLVAGV AALFAGAALS LGVALLVREQ WQGAVHTRFE RRTSHVTAML RHELQTGAAV
LESARGAFLL APQMTPEQWR RYADTLELDS GRSPVRQLGY APLSPATRSA LAGDAPLPAG
PFAVATLSAP LSSAAGARFG APDQAPLARA LRTGNVALGI HPADDDTSRD TRILMLFVPA
TPSSRTPVTP AGAHDTGVGG VLFAELSPNR VVERALDAER GLDLRMSAGD DPHPIASAET
TTDEASTSPD LMRRTDQLNF GGTVLTLAYS ADGRPSATGA QRAAGTVLAA GLIASFAFAA
LIHALLRGRA GTADTGASSR GILNEARMMG IIRSSMEAII TIDEKQTVVI FNPMAEQVFG
VSAMEAIGAP LSRFIPERFR TAHAKHVDQF GVTGVSERQM GRQRVLFGLR GNGEEFPIEA
SISQIRDASG KLYTVMLRDI TERQRAENAL KQSREELREL SANLQNVREE EKTRIARELH
DDLGQQLTAL KMDLSVIEQQ LRAPGRAQPN DDVLSHLQGM RRLIDATVAS VRRIAADLRP
VMLDDLGLVP AIEWLANDFT NRYGIDVERH IETGGLTFTS AGATTLFRIV QEALTNVARH
ADATRVALRL DIEEGFCVLR VADNGRGAAP GGSAHEDKSF GLIGIRERAH MLGGNVTIDT
ALARGFSITV AFPLGTVHQE TTLT
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