| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4232 |
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| Symbol | |
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| ID | 6181234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1289612 |
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| End bp | 1290997 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684001 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001810912 |
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| Protein GI | 172063261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0158542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCTG GAAACGAGAA GGACGGCCTG AAGCGGGGGC TGAAGAACCG GCACATCCAG
CTGATCGCGC TCGGCGGCGC GCTCGGCACG GGGCTGTTCC TCGGCATCGC GCAGACGATC
AAGATGGCCG GGCCGTCCGT GCTGCTCGGC TACGCAGTGG CCGGCGTCGT TGCGTTCTTC
ATCATGCGCC AGCTCGGCGA GATGGTCGTC GACGAGCCGG TGGCCGGCTC TTTCAGCTAC
TTCGCGGACA AATACGTCGG TCACTTCACC GGCTTCCTGT CCGGCTGGAA CTACTGGGTG
CTGTACATCC TCGTGAGCAT GGCCGAGCTG TCGGCCGTCG GGATCTACGT GCAGTACTGG
TGGCCCGGCG TGCCGACCTG GGTGTCCGCG CTGGTGTTCT TCGTCGCGAT CAACCTGCTG
AACCTGGCGA GCGTGAAGTC GTACGGCGAG ACGGAATTCT GGTTCTCGAT CATCAAGGTC
GCCGCGATCG TCGGGATGAT CGGCTTCGGC GGCTGGCTGC TCGCGAGCGG CCACGCGGGG
CCGGAGGCGG GCATCGCGAA CCTCTGGCAG CACGGCGGCT TCTTCCCGAA CGGCGTGTCG
GGGCTCGTGA TGTCGATGGC GGCGATCATG TTCTCGTTCG GCGGGCTGGA GCTGATCGGC
ATCACCGCGG CCGAGGCCGA CGATCCGAAG CACAGCATTC CGCGTGCGAC CAACCAGGTG
ATCTACCGGA TCCTGATTTT CTACATCGGC GCGCTGGCGG TGCTGCTGTC GCTGTATCCG
TGGGAAAAGG TCGTCACCGG CGGCAGCCCG TTCGTGCTGA TCTTCCATGC GCTGAGCAGC
AACCTGGTCG CGAACGTGCT GAACGTGGTC GTGCTGACGG CCGCGCTGTC GGTCTACAAC
AGCGGCGTGT ACAGCAACAG CCGGATGCTG TTCGGCCTCG CGAAGCAGGG CAACGCGCCG
AAGGTGCTGT GCTCGGTGAA CAAGCGCGGC ATTCCGCTCG CCGCGCTCGG CGCGTCGGCG
CTCGCGACCG GCGCGTGCGT GCTGGTCAAC TACTTCATGC CGGGCAAGGC GTTCGAGGTG
CTGATGGGCC TCGTCGTGTC GGCGCTGATC ATCAACTGGG CGATGATCAC GCTGATCCAC
CTGAAGTTCC GCCAGGCCAA GCGCATCGCC GGAGAGCAGA CTTCGTTCCG CAGTCTGGGC
TATCCTTTCA CGAATTACCT GTGCCTGGTG TTCATGGCCG GCATTCTCGT CGTGATGTAC
CTGACGCCGG ATCTCCGTCT GTCGGTGTAC TTGATCCCCG TATGGCTCGC GGTGCTCGCG
ATCGGGTATC GCTTCCGTCA GAAGAATGCG GGCTACGCGA TGCGCGACGG CGCATCCGCG
CGCTGA
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| Protein sequence | MVSGNEKDGL KRGLKNRHIQ LIALGGALGT GLFLGIAQTI KMAGPSVLLG YAVAGVVAFF
IMRQLGEMVV DEPVAGSFSY FADKYVGHFT GFLSGWNYWV LYILVSMAEL SAVGIYVQYW
WPGVPTWVSA LVFFVAINLL NLASVKSYGE TEFWFSIIKV AAIVGMIGFG GWLLASGHAG
PEAGIANLWQ HGGFFPNGVS GLVMSMAAIM FSFGGLELIG ITAAEADDPK HSIPRATNQV
IYRILIFYIG ALAVLLSLYP WEKVVTGGSP FVLIFHALSS NLVANVLNVV VLTAALSVYN
SGVYSNSRML FGLAKQGNAP KVLCSVNKRG IPLAALGASA LATGACVLVN YFMPGKAFEV
LMGLVVSALI INWAMITLIH LKFRQAKRIA GEQTSFRSLG YPFTNYLCLV FMAGILVVMY
LTPDLRLSVY LIPVWLAVLA IGYRFRQKNA GYAMRDGASA R
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