Gene BamMC406_4229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4229 
Symbol 
ID6179827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1285869 
End bp1287542 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content67% 
IMG OID641683998 
Productphospholipase C 
Protein accessionYP_001810909 
Protein GI172063258 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3511] Phospholipase C 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTC AAGCCTTGCT CGTCACCGCC TGTGCAGCCG CAGCGCTTGC GCTGTTCGCC 
TGCGGCGGCA GCGACGATCC GACGTCGACG CCCGCGGTGT CGTCGCAGGA TGCGCTGCAG
ACCGCCACGC CGATCAAGCA CGTCGTCGTG ATCTACGGCG AAAACGTGTC GTTCGACCAC
TACTTCGGCA CCTACCCGAA CGCGTCGAAC CCGTCCGGCG AACCGGCCTT CACCGCCAAG
CCCGGCACGC CGACGGTCAA CGGGCTGACG GGCACGCTGC TCACCGCGAA CCCGAACTTC
ACGAACACGG CCAACGGCAC CGACGCCGCG AACCCCTTCC GCCTCGACCG CACGCAGGCC
GCGACGGCCG ACCAGAACCA CGCGTACACG GCCGAGCAGC AGGCCGAGGA CAACGGCCTC
GCCGACCTGT TCCCGAAATA CACCGGCAAG GGCTCGTCCG GGGGCGCCGG CGCATTCGGC
ACGAAGGGTC AGGTGATGGG CTACTTCGAC GGCAACACCG TCACCGCGCT GTGGAACTAC
GCACAGCGCT TCGCGATGAG CGACAACGCG TATACGACGG TCTACGGCCC GTCGACGCCG
GGCGCGCTGA ACGTCGTGTC GGGGCAGACC AACGGGATGC AGATCGTCAA GACGTCGAAG
CAGCCGTCGA CGCTCGCCGC CACCTCGTAC TACATCAACG ACGGCCAGGG CGGCTTCACG
ATGATCAACG ACGTCGACCC CGGCTTCGAC GTGTGCTCGA GCACGACCGA CCAGGCGATG
ATGACCGGCA AGAACATCGG CGACCTGCTG AACGCCGCGA AGATCACGTG GGGCGGCTTC
ATGGGCGGCT TCAACCTGTC GACGACCAAC GGCAACGGCA CGACCGGCTG TAACCGCAGC
ACGGTCGCCA CCGCCGTGAA CGCCGCGACG GCCGACTACA TCCCGCACCA CAACTGGTTC
CAGTACTACG CATCGACCGC GAACCCGCAG CACACGAGGC CGAGCAGCGT CGCGGCGATC
GGTTCGAGCG TCCAGGCCGA CGGCAAGACG GCCGAGCCGG CGAACCACCA GTACGACAGC
GACGACTTCT TCGCGGCCGT GAAGGCCGGC AACTTCCCGT CGGTCAGCTT CCTCAAGGCG
CCGGCCGCGC AGGATGCGCA CGCGGGCTAC TCGGATCCGC TCGACGAGCA GGCGTTCGTG
ACGAAGGTCG TCAACTTCCT GCAGCAGCAG CCCGACTGGA AGAACACGGC CGTGATCGTC
ACCTACGACG ACTCCGACGG CTGGTACGAC CACGCCTACA CGGCGCCAAC CCACGCGTCG
TCCGATGCGG TCGACCAGGT CAACGGCAAC GGCGCATGCG GCACGGGCGG CACCACCGGC
GTGAACGGCG GCACCGTGAA CGGCCGCTGC GGTCCGGGTG TGCGCATCCC GCTGGTCGTG
ATCTCGCCGT ACGCGAAGCA GAACTATGTC GACCACACGA TGATCGACCA GGCGTCCGTC
GTGCGCTTCA TCGAGGACAA CTGGCTCGGC GGCCAGCGCA TCGGCGGCGG TTCGTTCGAT
GCGACGGCGG GCGACCTGCG CGGGCTGTTC GACTTCGCGT CGAAGCCGAA TACGGCGCCG
CTGTATCTCG ATCCGACGCA AGGCACCGTG CTGAGCGCGG CGCCGTCGAT CTGA
 
Protein sequence
MFRQALLVTA CAAAALALFA CGGSDDPTST PAVSSQDALQ TATPIKHVVV IYGENVSFDH 
YFGTYPNASN PSGEPAFTAK PGTPTVNGLT GTLLTANPNF TNTANGTDAA NPFRLDRTQA
ATADQNHAYT AEQQAEDNGL ADLFPKYTGK GSSGGAGAFG TKGQVMGYFD GNTVTALWNY
AQRFAMSDNA YTTVYGPSTP GALNVVSGQT NGMQIVKTSK QPSTLAATSY YINDGQGGFT
MINDVDPGFD VCSSTTDQAM MTGKNIGDLL NAAKITWGGF MGGFNLSTTN GNGTTGCNRS
TVATAVNAAT ADYIPHHNWF QYYASTANPQ HTRPSSVAAI GSSVQADGKT AEPANHQYDS
DDFFAAVKAG NFPSVSFLKA PAAQDAHAGY SDPLDEQAFV TKVVNFLQQQ PDWKNTAVIV
TYDDSDGWYD HAYTAPTHAS SDAVDQVNGN GACGTGGTTG VNGGTVNGRC GPGVRIPLVV
ISPYAKQNYV DHTMIDQASV VRFIEDNWLG GQRIGGGSFD ATAGDLRGLF DFASKPNTAP
LYLDPTQGTV LSAAPSI