Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4229 |
Symbol | |
ID | 6179827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1285869 |
End bp | 1287542 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641683998 |
Product | phospholipase C |
Protein accession | YP_001810909 |
Protein GI | 172063258 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCGTC AAGCCTTGCT CGTCACCGCC TGTGCAGCCG CAGCGCTTGC GCTGTTCGCC TGCGGCGGCA GCGACGATCC GACGTCGACG CCCGCGGTGT CGTCGCAGGA TGCGCTGCAG ACCGCCACGC CGATCAAGCA CGTCGTCGTG ATCTACGGCG AAAACGTGTC GTTCGACCAC TACTTCGGCA CCTACCCGAA CGCGTCGAAC CCGTCCGGCG AACCGGCCTT CACCGCCAAG CCCGGCACGC CGACGGTCAA CGGGCTGACG GGCACGCTGC TCACCGCGAA CCCGAACTTC ACGAACACGG CCAACGGCAC CGACGCCGCG AACCCCTTCC GCCTCGACCG CACGCAGGCC GCGACGGCCG ACCAGAACCA CGCGTACACG GCCGAGCAGC AGGCCGAGGA CAACGGCCTC GCCGACCTGT TCCCGAAATA CACCGGCAAG GGCTCGTCCG GGGGCGCCGG CGCATTCGGC ACGAAGGGTC AGGTGATGGG CTACTTCGAC GGCAACACCG TCACCGCGCT GTGGAACTAC GCACAGCGCT TCGCGATGAG CGACAACGCG TATACGACGG TCTACGGCCC GTCGACGCCG GGCGCGCTGA ACGTCGTGTC GGGGCAGACC AACGGGATGC AGATCGTCAA GACGTCGAAG CAGCCGTCGA CGCTCGCCGC CACCTCGTAC TACATCAACG ACGGCCAGGG CGGCTTCACG ATGATCAACG ACGTCGACCC CGGCTTCGAC GTGTGCTCGA GCACGACCGA CCAGGCGATG ATGACCGGCA AGAACATCGG CGACCTGCTG AACGCCGCGA AGATCACGTG GGGCGGCTTC ATGGGCGGCT TCAACCTGTC GACGACCAAC GGCAACGGCA CGACCGGCTG TAACCGCAGC ACGGTCGCCA CCGCCGTGAA CGCCGCGACG GCCGACTACA TCCCGCACCA CAACTGGTTC CAGTACTACG CATCGACCGC GAACCCGCAG CACACGAGGC CGAGCAGCGT CGCGGCGATC GGTTCGAGCG TCCAGGCCGA CGGCAAGACG GCCGAGCCGG CGAACCACCA GTACGACAGC GACGACTTCT TCGCGGCCGT GAAGGCCGGC AACTTCCCGT CGGTCAGCTT CCTCAAGGCG CCGGCCGCGC AGGATGCGCA CGCGGGCTAC TCGGATCCGC TCGACGAGCA GGCGTTCGTG ACGAAGGTCG TCAACTTCCT GCAGCAGCAG CCCGACTGGA AGAACACGGC CGTGATCGTC ACCTACGACG ACTCCGACGG CTGGTACGAC CACGCCTACA CGGCGCCAAC CCACGCGTCG TCCGATGCGG TCGACCAGGT CAACGGCAAC GGCGCATGCG GCACGGGCGG CACCACCGGC GTGAACGGCG GCACCGTGAA CGGCCGCTGC GGTCCGGGTG TGCGCATCCC GCTGGTCGTG ATCTCGCCGT ACGCGAAGCA GAACTATGTC GACCACACGA TGATCGACCA GGCGTCCGTC GTGCGCTTCA TCGAGGACAA CTGGCTCGGC GGCCAGCGCA TCGGCGGCGG TTCGTTCGAT GCGACGGCGG GCGACCTGCG CGGGCTGTTC GACTTCGCGT CGAAGCCGAA TACGGCGCCG CTGTATCTCG ATCCGACGCA AGGCACCGTG CTGAGCGCGG CGCCGTCGAT CTGA
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Protein sequence | MFRQALLVTA CAAAALALFA CGGSDDPTST PAVSSQDALQ TATPIKHVVV IYGENVSFDH YFGTYPNASN PSGEPAFTAK PGTPTVNGLT GTLLTANPNF TNTANGTDAA NPFRLDRTQA ATADQNHAYT AEQQAEDNGL ADLFPKYTGK GSSGGAGAFG TKGQVMGYFD GNTVTALWNY AQRFAMSDNA YTTVYGPSTP GALNVVSGQT NGMQIVKTSK QPSTLAATSY YINDGQGGFT MINDVDPGFD VCSSTTDQAM MTGKNIGDLL NAAKITWGGF MGGFNLSTTN GNGTTGCNRS TVATAVNAAT ADYIPHHNWF QYYASTANPQ HTRPSSVAAI GSSVQADGKT AEPANHQYDS DDFFAAVKAG NFPSVSFLKA PAAQDAHAGY SDPLDEQAFV TKVVNFLQQQ PDWKNTAVIV TYDDSDGWYD HAYTAPTHAS SDAVDQVNGN GACGTGGTTG VNGGTVNGRC GPGVRIPLVV ISPYAKQNYV DHTMIDQASV VRFIEDNWLG GQRIGGGSFD ATAGDLRGLF DFASKPNTAP LYLDPTQGTV LSAAPSI
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