| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4224 |
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| Symbol | |
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| ID | 6179189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1280842 |
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| End bp | 1281639 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683993 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001810904 |
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| Protein GI | 172063253 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.390513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTT CCGACCTGCT GAAACCCTAT GACGGCCTGC GCGTGCTCGT GACGGGCGGC
GCGTCGGGCA TCGGTCTCGA GATCGCCGAC GCGTTCGCCG AATGCGGTGC GCGCGTCCAC
GTGTGCGATG CGTCGCAAGC CGCGATCGCG GCGCTGGCGG ACCGGCCGTC GCGCGCCGCG
ATCAGTGCGA CGCTGGCCGA CGTATCCGAT CCGGCCGCGG TCGAGCGCGT GTTCGCGGAC
ATAGCGACGA CGCTCGGCGG CCTCGACGTG CTCGTCAACA ACGCAGGCAT TGCCGGCCCC
ACGGGCGGCA TCGACGAAAT CGATCCCGTG CAGTGGGAGC AAACGATCGC GATCAACCTG
AACGCGCAAT TCCAGTTCGC GCGGCGCGCG GTGCCGCTCC TGCGTGACGC GAAGCACGGT
GGCGCGATCA TCGCGCTGTC GTCGGTCGCG GGGCGGCTCG GCTACGCGTT CCGCACGCCC
TATGCGGCGA CCAAGTGGGC CGTCGTCGGT CTCGTGAAAA GCCTCGCGAT CGAGCTCGGG
CCGCTCGGCA TCCGCGTGAA CGCAATCCAG CCCGGCATCG TACGCGGGCC GCGGATGCGC
CGCGTGATCG AAGCACGCGC GCAGCAGCTC GGCATCGGCT ACGACGAGAT GGAGAAGCGC
TATCTCGAGA AGATCTCGCT GCGACGCATG ACGGATCCGG CCGAAATCGC CGCGACCGCG
CTGTTTCTGT GCTCGCCCGG CGGGCACGGC ATCACCGGGC AGGCGATTTC CGTCTGCGGC
AACGTCGAAG TGCTCTGA
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| Protein sequence | MTASDLLKPY DGLRVLVTGG ASGIGLEIAD AFAECGARVH VCDASQAAIA ALADRPSRAA
ISATLADVSD PAAVERVFAD IATTLGGLDV LVNNAGIAGP TGGIDEIDPV QWEQTIAINL
NAQFQFARRA VPLLRDAKHG GAIIALSSVA GRLGYAFRTP YAATKWAVVG LVKSLAIELG
PLGIRVNAIQ PGIVRGPRMR RVIEARAQQL GIGYDEMEKR YLEKISLRRM TDPAEIAATA
LFLCSPGGHG ITGQAISVCG NVEVL
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