| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4223 |
|---|
| Symbol | |
|---|
| ID | 6179339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1279874 |
|---|
| End bp | 1280806 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641683992 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810903 |
|---|
| Protein GI | 172063252 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.825511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.514911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAACG CTCGCAAAGT CATCATCACC TGCGCGCCGA CCGGCGCGAT CCACACGCCG
TCGATGTCGC CGTACCTGCC CGTCACGCCG CATCAGATCG AGACGGCCGC CGTCGCGGCC
GCGCAGGCCG GCGCCGCGAT CCTGCATCTG CACGCCCGCA ACCCGTCGGA CGGCAAGCCG
ACGCAGGACC CGACCGTGTT CGCCGAATTT CTGCCGCGCA TCAAGGCGCA GACCGACGCG
GTGATCAATC TCACGTCGGG CGGCAGCCCG CACATGACCG TCGACGAACG GCTGCAGCCC
GCGCTGCATT TCCAGCCCGA AATCGCATCG CTGAACATGG GTTCGATGAA CTTCGGACTC
TATCCGATGC TCGAGCGCTT TCGCGAACTG AAGCATCCGT GGGAACGCGA ACACCTCGAG
AAGAGCCGCG ATCTGGTATT CAAGAACACG TTCGCCGACA TCGAGACGAT CCTCACGCGC
TGCGGCGCGA ACGGTACACG GTTCGAGTTC GAGTGCTACG ACATCTCGCA CCTGTACAAC
CTCGCGCACT TCGTCGACCG CGGGCTCGCG AAGCCGCCGT TCTTCGTGCA GAGCGTGTTC
GGCCTGCTCG GCGGCATCGG CGCGCATCCT GAAGACCTGA TGCACATGCG CCGCACGGCA
GACCGCCTGT TCGGCCAGGA CTACGTGTGG TCGATTCTCG GCGCGGGCCG CAACCAGATT
CCGCTCGCGA CGATCGGCGC CGCCCAGGGC GCGAACGTGC GGGTCGGACT CGAGGACTCG
CTGTGGATCG CGCCCGGCCA GCTCGCCGAA TCGAGCGCCG CGCAGGTACT GAAGATGCGG
CAGGTGCTCG AGGGGCTGTC GCTGGAGATC GCGACGCCGG CCGAGGCGCG CGCGATGCTC
GATCTCAAGG GTGGCGACGC GGTCCGGTTC TGA
|
|---|
| Protein sequence | MANARKVIIT CAPTGAIHTP SMSPYLPVTP HQIETAAVAA AQAGAAILHL HARNPSDGKP
TQDPTVFAEF LPRIKAQTDA VINLTSGGSP HMTVDERLQP ALHFQPEIAS LNMGSMNFGL
YPMLERFREL KHPWEREHLE KSRDLVFKNT FADIETILTR CGANGTRFEF ECYDISHLYN
LAHFVDRGLA KPPFFVQSVF GLLGGIGAHP EDLMHMRRTA DRLFGQDYVW SILGAGRNQI
PLATIGAAQG ANVRVGLEDS LWIAPGQLAE SSAAQVLKMR QVLEGLSLEI ATPAEARAML
DLKGGDAVRF
|
|---|
| |