| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4221 |
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| Symbol | |
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| ID | 6179337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1276923 |
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| End bp | 1278245 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683990 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001810901 |
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| Protein GI | 172063250 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.545369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.396779 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCCAAC GCATTTCCCG CTTTTTCACG CAGGTGGTCC ACCGCGTGCT GCCTGACCCG
TTGATTTTCG CGATCTTGCT GACGATCGTC ACGTTCGCGC TCGCCTTCGG CCTCACGCCG
ACCACGCCGG TGCAACTCAC GACGATGTGG GGTTCAGGTT TCTGGAACCT CCTCGCGTTT
TCGATGCAGA TGGTGATGAT CCTCGTCACC GGCCACGCGC TCGCGAGTTC GCCGCCCGTG
CGCCGCCTGC TCGTTGCGCT CGCAAGCACC GCGCGCACGC CGGGGCAGGG CGTGATGCTC
GTCGCGTTCG TCGGCGCGCT CGCCTGCGCG ATCAACTGGG GCTTCGGCCT CGTGCTCGGC
GCGATGCTCG CGCGCGAAGT CGCGCGCCGC GTGGCCGGCA GCGACTACCG GCTGCTCGTC
GCGTCCGCGT ACATGGGTTT CCTGAGCTGG CACGGCGGGC TGTCGGGTTC GGTCCCGCTC
GTCGCCGCGA CGAAGGGCAA TCCGATGGAA AAGACCATCG GGCTGATTCC GGTGTCGGAC
ACGATCTTCA CCGGCTACAA CGCGTTCATC ACGATCGGGC TGATCGTGAT GCTGCCGTTT
CTCGCGCGGA TGATGATGCC GAAGCCCGGC GACGTCGTCA GCGTCGATCC GGCGCTGCTC
GCGGAACCGC CAAGCGTCGA GCGCCAGCTC GGGCCCGACG CGACGTTCGC GGAACGGATG
GAAGAGAGCC GCGCGCTGTC GGTCTTCGTT GCGGCGCTTT GCGCGGCGTT CCTCGTGCTG
CGTTTCATTC AGAAGGGCTT CGCGCTCGAC ATCGACACCG TGAACCTCGC GTTCCTCGCG
GCCGGCATCC TGCTGCACCG TACGCCGATG GCCTATGCGC GCGCGGTGGC CGGCGCGGCG
CGCGGCGCAT CGGGAATCAT GATCCAGTTT CCCTTTTACG CGGGCATCCA GGCGCTGATG
GATCACTCGG GGCTCGCGGG CGTGATCACG AAGTGGTTCG TCGATATCGC GAACGTGCAC
ACGTTCCCGC TGCTTGCATT CCTCAGTTCG GCCGTGATCA ATTTCGCGGT GCCGTCGGGC
GGCGGCCACT GGGTCGTGCA GGGCCCGTTC GTGATGCCGG CCGCGCAGGC GCTCGGCGCC
GATCTGGGCA AGGCCGCGAT GGCGATCGCC TACGGCGAGG CGTGGACCAA CATGGCGCAG
CCGTTCTGGG CGCTGCCCGC ACTCGCGATC GCGGGGCTCG GCGTGCGCGA CATCATGGGG
TACTGCGTGA CGACGCTGCT GTTCTCGGGC GTGGTGTTCG TCGCAGGGAT GTATCTGTTC
TGA
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| Protein sequence | MVQRISRFFT QVVHRVLPDP LIFAILLTIV TFALAFGLTP TTPVQLTTMW GSGFWNLLAF
SMQMVMILVT GHALASSPPV RRLLVALAST ARTPGQGVML VAFVGALACA INWGFGLVLG
AMLAREVARR VAGSDYRLLV ASAYMGFLSW HGGLSGSVPL VAATKGNPME KTIGLIPVSD
TIFTGYNAFI TIGLIVMLPF LARMMMPKPG DVVSVDPALL AEPPSVERQL GPDATFAERM
EESRALSVFV AALCAAFLVL RFIQKGFALD IDTVNLAFLA AGILLHRTPM AYARAVAGAA
RGASGIMIQF PFYAGIQALM DHSGLAGVIT KWFVDIANVH TFPLLAFLSS AVINFAVPSG
GGHWVVQGPF VMPAAQALGA DLGKAAMAIA YGEAWTNMAQ PFWALPALAI AGLGVRDIMG
YCVTTLLFSG VVFVAGMYLF
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