Gene BamMC406_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4214 
Symbol 
ID6179849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1269133 
End bp1270080 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID641683983 
ProductLysR family transcriptional regulator 
Protein accessionYP_001810894 
Protein GI172063243 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.383155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCC TACAAAACAT GCGGGTGTTT ACGCGCGTCG TCGAGACGGG CAGTTTCACC 
GCGGCCGCGC AATCGCTGAA TTCGACGACG GGCGCGATGT CGCGCGCGGT GTCGGAGCTC
GAGGCGCGCC TGCGCACCCG TCTGATGAAT CGCTCGACAC GCCGTCTCGC GCTGACGTCG
GCCGGCGAAA GCTATCTGCG GCGCTGCCGG CAGATCCTCG CCGACGTCGA TCGCGCCGAG
GAAGAAGCAA GCTGCGCGCA CGAGCGGCCA GCCGGCGTGC TGCGCATGCA CAGCTTCGCG
AGCGTCGGCC ATCACTACGT GATGCCCGCG CTGACGCGCT ATCACACGCA GTATCCGGAC
GTGTCGATCG AGCTGTCGCT GTCGCAGCGC ATGCCCGACC TGTTCGACGG CACGAGCGAC
ATGGCGGTCG TGACCGCGTC GTCGCTGCCC GATTCGGAAC TCGTGTCGCA CCTGCTGGGC
TCGACCTTCA GCATCCTGTG CGCGTCGCCC GAGTACGTGA AGCGCCACGG CGCGCCCGCA
CGCCCGCAGG ATCTCGGCGC GCACGCATGC CTGACGCTCT GCACGCCGGC CTTCCCGACT
CACGAATGGG TGCTCGAAGG CGCCGAGGGC GTCGAGCAGA TCCATGTCGC CGGCCCGGTG
CAGACCAATA CGGCCGAGTC GCTCGCGCTC GCGATCCGCG ACGGTATCGG GATCGGCATG
CTGCCGCTGT ATTCGGCGAT CGACGCGCTG CGCGACGGCA CGCTCGTGCG CGTGCTGCCC
GAGCACATCC TGCAGAAGAT GAACGTGTAT GCGCTGTATC CGTCGCGCCG CTTCGTCGAC
GCGAAGGTGC GCACCTGGGT CGAGATGCTG CGGGCGCAGG TGCCGGGGAT GATCGCGCGC
GACGTCGAGA TGCTGAACGC GATCGACCGC GAACCGCAGG CCGCGTGA
 
Protein sequence
MDTLQNMRVF TRVVETGSFT AAAQSLNSTT GAMSRAVSEL EARLRTRLMN RSTRRLALTS 
AGESYLRRCR QILADVDRAE EEASCAHERP AGVLRMHSFA SVGHHYVMPA LTRYHTQYPD
VSIELSLSQR MPDLFDGTSD MAVVTASSLP DSELVSHLLG STFSILCASP EYVKRHGAPA
RPQDLGAHAC LTLCTPAFPT HEWVLEGAEG VEQIHVAGPV QTNTAESLAL AIRDGIGIGM
LPLYSAIDAL RDGTLVRVLP EHILQKMNVY ALYPSRRFVD AKVRTWVEML RAQVPGMIAR
DVEMLNAIDR EPQAA