Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4214 |
Symbol | |
ID | 6179849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1269133 |
End bp | 1270080 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683983 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001810894 |
Protein GI | 172063243 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.383155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATACCC TACAAAACAT GCGGGTGTTT ACGCGCGTCG TCGAGACGGG CAGTTTCACC GCGGCCGCGC AATCGCTGAA TTCGACGACG GGCGCGATGT CGCGCGCGGT GTCGGAGCTC GAGGCGCGCC TGCGCACCCG TCTGATGAAT CGCTCGACAC GCCGTCTCGC GCTGACGTCG GCCGGCGAAA GCTATCTGCG GCGCTGCCGG CAGATCCTCG CCGACGTCGA TCGCGCCGAG GAAGAAGCAA GCTGCGCGCA CGAGCGGCCA GCCGGCGTGC TGCGCATGCA CAGCTTCGCG AGCGTCGGCC ATCACTACGT GATGCCCGCG CTGACGCGCT ATCACACGCA GTATCCGGAC GTGTCGATCG AGCTGTCGCT GTCGCAGCGC ATGCCCGACC TGTTCGACGG CACGAGCGAC ATGGCGGTCG TGACCGCGTC GTCGCTGCCC GATTCGGAAC TCGTGTCGCA CCTGCTGGGC TCGACCTTCA GCATCCTGTG CGCGTCGCCC GAGTACGTGA AGCGCCACGG CGCGCCCGCA CGCCCGCAGG ATCTCGGCGC GCACGCATGC CTGACGCTCT GCACGCCGGC CTTCCCGACT CACGAATGGG TGCTCGAAGG CGCCGAGGGC GTCGAGCAGA TCCATGTCGC CGGCCCGGTG CAGACCAATA CGGCCGAGTC GCTCGCGCTC GCGATCCGCG ACGGTATCGG GATCGGCATG CTGCCGCTGT ATTCGGCGAT CGACGCGCTG CGCGACGGCA CGCTCGTGCG CGTGCTGCCC GAGCACATCC TGCAGAAGAT GAACGTGTAT GCGCTGTATC CGTCGCGCCG CTTCGTCGAC GCGAAGGTGC GCACCTGGGT CGAGATGCTG CGGGCGCAGG TGCCGGGGAT GATCGCGCGC GACGTCGAGA TGCTGAACGC GATCGACCGC GAACCGCAGG CCGCGTGA
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Protein sequence | MDTLQNMRVF TRVVETGSFT AAAQSLNSTT GAMSRAVSEL EARLRTRLMN RSTRRLALTS AGESYLRRCR QILADVDRAE EEASCAHERP AGVLRMHSFA SVGHHYVMPA LTRYHTQYPD VSIELSLSQR MPDLFDGTSD MAVVTASSLP DSELVSHLLG STFSILCASP EYVKRHGAPA RPQDLGAHAC LTLCTPAFPT HEWVLEGAEG VEQIHVAGPV QTNTAESLAL AIRDGIGIGM LPLYSAIDAL RDGTLVRVLP EHILQKMNVY ALYPSRRFVD AKVRTWVEML RAQVPGMIAR DVEMLNAIDR EPQAA
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