| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4211 |
|---|
| Symbol | |
|---|
| ID | 6180025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1265125 |
|---|
| End bp | 1266234 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641683980 |
|---|
| Product | peptidase S58 DmpA |
|---|
| Protein accession | YP_001810891 |
|---|
| Protein GI | 172063240 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3191] L-aminopeptidase/D-esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.131306 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCACGA GGGATCTCGG CATCCGAATC GGACTCGGCA CGCCGGGCCG TTTCAACGCG
ATCACGGACG TACCGGGCGT GCGGGTCGGA CATTGCACGC TGAACGTCGA GAACGGCGAC
GCATCGATCG GCACCGGCGT GACCGTCATC GAGCCGCGCG CGGGCGCCGT GCACGATTCG
CCGTGCTTCG CGGGTGTCCA CGTGCTGAAC GGCAACGGCG ATGCGACCGG GCTCGAATGG
ATCCGCGAAG CCGGCCTGCT GACGACGCCG ATCGCCTATA CGAACACGCA CAGCGTCGGC
GCGGTGCGCG ATGCGCTGGT CGCGAACGAA CGCGAAGCGG CGGCCGGCCG CGTGTACTGG
TGCATGCCGG TCGTGATGGA AACCTACGAC GGGCTGCTCA ACGACATCTG GGGGCAGCAC
GTGAATGCCG CGCACGTCCA GCGTGCGCTG GCCGCGGCGC AGTCGGGGCC GGTCGCCGAA
GGCGGCGTCG GCGGCGGCAC GGGGATGATC TGCCACGAGT TCAAGGGCGG CATCGGCACC
GCGTCGCGGG TGGTCGCGGC CGACGCGGGC GGCTGGACCG TCGGCGCGCT CGTGCAGGCG
AACTACGGCG TGCGCGAGAT GCTGCGCGTG GCCGGTTATC CGGTCGGCGA GGTGCTCGGG
CACGTGCATT CGCCGTTCCG CGCGCCCGAT GCGCGAGGCG AAGCCGGGAT GGGCTCGATC
GTCGTCACGA TCGCGACCGA CGCGCCGCTG CTGCCGCACC AGTGCACGCG CCTCGCGCAG
CGCGCGAGCG TCGGGTTGGC TCGCGTTGGC GGCGGCACGG AGGATTCGAG CGGCGACATC
TTCCTCGCGT TTGCGACGGG CAACGACGGG CTGCCGGCCG CGAACTACGG CAGCAAGGGC
GCGCCCACGA CAGCCGTGAC GATGGTGAAC AACGACCATA TCTCGGCATT GTTCGCCGCC
GCGGCGGAAG CGGTGGAGGA AGCGATCGTG AATGCGCTGG TCGCGGGGAG CGACGTCGAA
TCGCGCGGCG CGCGGGTCGA AGGGCTGGGG CACGCGCGCT TGCTCGATGC ATTGCGCGAA
GTGGGGTGGC GGCCGGGACG CGGCGCCTGA
|
|---|
| Protein sequence | MRTRDLGIRI GLGTPGRFNA ITDVPGVRVG HCTLNVENGD ASIGTGVTVI EPRAGAVHDS
PCFAGVHVLN GNGDATGLEW IREAGLLTTP IAYTNTHSVG AVRDALVANE REAAAGRVYW
CMPVVMETYD GLLNDIWGQH VNAAHVQRAL AAAQSGPVAE GGVGGGTGMI CHEFKGGIGT
ASRVVAADAG GWTVGALVQA NYGVREMLRV AGYPVGEVLG HVHSPFRAPD ARGEAGMGSI
VVTIATDAPL LPHQCTRLAQ RASVGLARVG GGTEDSSGDI FLAFATGNDG LPAANYGSKG
APTTAVTMVN NDHISALFAA AAEAVEEAIV NALVAGSDVE SRGARVEGLG HARLLDALRE
VGWRPGRGA
|
|---|
| |