| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4210 |
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| Symbol | |
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| ID | 6180024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1263657 |
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| End bp | 1265060 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683979 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001810890 |
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| Protein GI | 172063239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.281547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATGA TGTCGGAATC GACGGGCACG CTGCAAGCGA CGCCCGCCAC GGAAGACGCG
CCGCGCGCGT TGTCGCAGAC GCTCAGCGTG CGCGATGCGG TGATGATCAC CGTGTCGGGC
GTGACGCCAG CAAGCTCGAT CTTCGTGATC GCGCCGTTCG CGATCCAGCA GGCCGGCAGC
GGCGCGGTGC TGTCGTTCCT GCTCGGCGGC GTGCTCGCGC TCGCGTTCGC GCTCTGCTAC
GCGGAGCTCA GCGCCGCGCA CCGCAGCGCG GGCGGCGAGT ACGTGATGGC CAAGCGCGTG
TTCGGCACGC TGCCCGGCTA CCTGACGTTC ATCACGGTGC TGTCCGTCAG CGTGTTCATC
CCGGCCGTGC TCGCGAGCGG CGCGGCGCCG TACTTGAACA ACGCGCTCGG CACGCACTTC
GGCAACCAGT CGGTCGCGCT GACGATCGTG CTGCTCAGTT ACGTGCTCGG CATGCTGAAC
ATCAAGACGA ATGCGTGGAT CACGGGCGCG TTTCTCGTCG TCGAGATCGG TGTGCTGATG
CTGATCGCGG GGCTCGGCTT CGGCGCGCCG CATCGCGGCG CCGAGGTGCT GTTCGCGCCG
GTCGTCGCGA GCGGCAATGC GCTGGAGCCC GCCACGTTCG CGGCGATCGT GCCCGCGATC
GGCACGGCGA TCTTCTGCTA CAACGGCTTC GGCTCCGCCG CGTATCTCGC GGAAGACCTG
CGCGGCGGCA ACCGCAACGT CGCGAAGGCG GTGATCTATT CGCTGCTGGT GATCCTCGTC
GTCGAACTGA TCCCGCTCAC CGCGATCGTG CTCGGCGCGC CGTCGCTGAC GGAGCTGACG
AAGAGCGCCG ACCCCATCGG CTATGTCGTG CGTTCGCTGA GCAACCCGGT GGTATCGCGC
GTGGTCAGCG GCGGGATCTT CCTGTCGGTG TTCAACGCGA TCATCGCGAT CGTGATCACG
ATGGGGCGCC TGTACAGCAG CGGCCGTCAT GCGCTCTGGT CGCGCACCTG CAACCGCGCG
TTCTCGACGA TCCATCCGCG CTTCGAATCG CCGTGGCTCG CGACGCTCGC GCTGGCGGTG
CCGTCGTCGG GGCTGGTGTT CGTGTCGAGC CTCGACGAGC TGACCGCGTT CACGGTCGAC
CTGCTGCTGC TGATCTATCT GGTCGTCGGG CTGGCCGCGC TCGCGAGCCG GTTCGTGCGC
CGCGACGTCG AACATCACTA CCGGATGCCG CTGTGGCCCG TGACGCCGCT CGTCGCGGTC
GCGGGCGCCG CGTACACGCT CTACACGACG CTGGCGACGG CGACCAAGCC GACCGACCTG
ATCATCATCG GCGCGCTGCT GGCGGCCGCG CTGGTGATGT ATGCGGTCTG GGCGCGCCAC
AGCGGCGCGT TCCGCGCGCT CTGA
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| Protein sequence | MAMMSESTGT LQATPATEDA PRALSQTLSV RDAVMITVSG VTPASSIFVI APFAIQQAGS
GAVLSFLLGG VLALAFALCY AELSAAHRSA GGEYVMAKRV FGTLPGYLTF ITVLSVSVFI
PAVLASGAAP YLNNALGTHF GNQSVALTIV LLSYVLGMLN IKTNAWITGA FLVVEIGVLM
LIAGLGFGAP HRGAEVLFAP VVASGNALEP ATFAAIVPAI GTAIFCYNGF GSAAYLAEDL
RGGNRNVAKA VIYSLLVILV VELIPLTAIV LGAPSLTELT KSADPIGYVV RSLSNPVVSR
VVSGGIFLSV FNAIIAIVIT MGRLYSSGRH ALWSRTCNRA FSTIHPRFES PWLATLALAV
PSSGLVFVSS LDELTAFTVD LLLLIYLVVG LAALASRFVR RDVEHHYRMP LWPVTPLVAV
AGAAYTLYTT LATATKPTDL IIIGALLAAA LVMYAVWARH SGAFRAL
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