| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4198 |
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| Symbol | |
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| ID | 6180568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1251056 |
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| End bp | 1252435 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641683967 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001810878 |
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| Protein GI | 172063227 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0649203 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.103576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAT CGCTTCCCGC CAAGGCGACG ATCGCGCACG CGAGTGCCGC GGCGTCGGCT
TCCGCATACG AATCCGCGCC CGCATCCGAT GCCGGCGACG CGCTGCTGTT CCGCAAGATC
GCGTGGCGGA TCGTGCCGTT CCTGTTCCTC TGCTATGTCG TGTCGTTCCT CGACCGCATC
AACATCGGCT TCGCGCAGTT GCAGATGAAG CACGACCTCG GCTTCAGCGA TGCGATGTAC
GGCCTCGGCG CCGCGGTGTT CTACGTCGGC TACGTGTTCT GCGAGGTGCC GAGCAACCTG
CTGCTCGCGC GCTTCGGCGC GCGCCGCACC TTCACGCGGA TCATGCTGCT GTGGGGCATC
GCGTCGACCG GGATGATGTT CGTGTCGCAG CCGTCGCATT TCTACGTGCT GCGCTTCCTG
CTCGGCGTGT TCGAGGCCGG CTTCTTTCCC GGCATCGTGC TGTACCTGAC CTACTGGTTC
CCGGCGAACC GGCGCGCGGC GGCGATCTCG GTGTTCTTCG CGGGCGTCGC GGTCGCGGGC
GTGCTCGGCG GCCTGGTGTC GGGCTGGATC ATGCGCGACA TGAGCGGCGT GCTCGGGCTG
CACGGCTGGC AGTGGATGTT CGCGATCGAA GGCGCGCCGG CCATCGTGCT CGCGGGCTTC
GCGTTCACGT ACCTGGTCGA CCGTCCGCAG GACGCCGCGT GGCTCACGTC CGACGAAAAG
GCGCGCATCG CCGCGCTGTG CGGCGACAGC CGTGCGCACG GCGCCGGTCA TGGCGCGCAC
GGCACACGCA GCCTGCTCGC CGCGCTCGCG AACCCGCGCG TCTACCTGTT CGCGTTCATC
TATTTTTCGC TCACGTGCGC ATCGCTGACG CTCAATTTCT GGATGCCGCT GATGATCCGC
GACTTCGGCG TGACCGACGT CGTGGCCGTG AGCCTCTACA CGGTCGTGCC GAACGCGGTC
GGCGCGGTCG GCCTGATCCT GATCGCGCGC CGCTCGGACC GCACCGGCGA GCGCCGCAAG
CACTTCGCGT GCTGCACGAT CGGCGGCGGC CTCGCCCTCG CGGCGCTGAC GCTGCACCTG
CACAGCTTCG CGGCGATGCT CGCGTGCCTG TCGATCGCGG CGACGCTGAT CTTCGCCGCG
CTGCCGATCT TCTGGGCCGT GCCGACCCGC TACCTGTCGG GCAACGCGGC CGCGGCCGGG
ATCGCGCTGA TCAGCAGCAT CGGGATCACG AGCGGCATCG TCAGCCCGTG GGTGATCGGG
CTGATCCGCA CGCGCACCGG CAGCATGGAT CTCGCCGTGT ATCTGCTGGC CGCGCTGCTC
GCGCTGAGCG GCGCCGCGCT GATGCTCGGC GTGAAGGGCG AACCCGCGCA GCGCGCCTGA
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| Protein sequence | MPQSLPAKAT IAHASAAASA SAYESAPASD AGDALLFRKI AWRIVPFLFL CYVVSFLDRI
NIGFAQLQMK HDLGFSDAMY GLGAAVFYVG YVFCEVPSNL LLARFGARRT FTRIMLLWGI
ASTGMMFVSQ PSHFYVLRFL LGVFEAGFFP GIVLYLTYWF PANRRAAAIS VFFAGVAVAG
VLGGLVSGWI MRDMSGVLGL HGWQWMFAIE GAPAIVLAGF AFTYLVDRPQ DAAWLTSDEK
ARIAALCGDS RAHGAGHGAH GTRSLLAALA NPRVYLFAFI YFSLTCASLT LNFWMPLMIR
DFGVTDVVAV SLYTVVPNAV GAVGLILIAR RSDRTGERRK HFACCTIGGG LALAALTLHL
HSFAAMLACL SIAATLIFAA LPIFWAVPTR YLSGNAAAAG IALISSIGIT SGIVSPWVIG
LIRTRTGSMD LAVYLLAALL ALSGAALMLG VKGEPAQRA
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