| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4196 |
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| Symbol | |
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| ID | 6179560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1248084 |
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| End bp | 1249814 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641683965 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001810876 |
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| Protein GI | 172063225 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.858157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.133552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTAA ACCTGCGGGC TGGCGCGTCA AGTGGCGTCG GATACCATGC GGGGTTTCGT
CAACGGAAGA TTCATCGCGT GCAGAACCAC GAAGTCAGCG CAGACGACGC GCAGCCCAAG
GCGCAGCGCG GGATCCAGAG CGTCGAGGTC GGCGGCCGGC TGCTCGACGC GCTCGCGCGC
CGGCGCAAGC CGCTCGGGCT GTCGGAGCTG GCGGCCGCGG CCGGGTTGTC GACCGCGCAG
GCGCATACCT ACCTCGTCAG CCTGACGCGG CTCGCGCTCG TGAAACGCGA CGCGCTCACC
GGCAACTACG AGCCGGGGCC GCTGTCGCTG CGGCTCGGAC TGATGTCGAT CGAACGCCAG
CCGGCCTATC GCGCGGCGCT GCCGCACGCG GCGCGACTCG CGGAAGCGGT CGGACTGAGC
GTCGCGCTGT CGGTGCCGGG CGTGCTCGGG CCGACGATCG TGCGCATCGA GCACGGCGGC
TATCCGTTGC ATGTGAACCT GCACGTCGGC TCGGTGATGT CGCTCGATAC GACGGCGACC
GGCCGCGTGT TCCGCGCGTT CGGCGACCCC GCCCTGCTGG ACACGATGGC AGCCAGCCAG
GCCGGCGCGG GAGACACGCT CGCGGGCGCG GAAGGCGAGC AGCCCACGTC CGATGCCGGC
GCGTGGCAGG CCGAGCTCGA TGCGATCCGC GCGCGCGGGA TCGAGCGCGG CGTGGACCGG
CCAAGCCCCG GCGTCAGCGC GATGTGTGTG CCGGTTCTGG ACGCGGACGG CCGCCTGCAA
CTCGCGTTGA CGGTGATCGG TTCGACCGGA TCGATCGATG TCGGCTGGGA CGGCCCGATC
GCGAACGCGT TGCGCGATGC GGCGCGGCAG GCCACCGCGT CACTCGATGC GGGGCGCGAC
GCGCAGCCAA GCGCGCCGGC CGCGGCTGCG TCTGTCCAGC GCCTGCCGCC CGCGCTCGCC
GACGACACGA AAGCCCAGCG CGGCATCAAC GCGCTCGACA GCACGGGCGA CCTGCTGCTC
GCGCTCGTGT CGGCGGGCCG CGCGCTGCCG CTGCGCGATC TCGCGGCGGC GGCCGGCATG
CCGGCCGCGA AGGCGTTTCC GCATCTGGTG AGCCTGCAGA AGATCGGCCT GCTGAGCCGC
GACGATGCCG GCTGCTTCGG CGGGGGCCCG CTCGGCCAGG CGCTCGGCCT GATCGCGATG
CAGCGCGTGT CGCCGACGCG CGATGCCGAA GCGGAGATCG TCGCGCTGGC GGCCGCGACC
GACATGAGCG TCGCCGCGGC GACCCTCGGG CCGCTCGGGC CGACCGTGAT CCGCCTCGAG
GAATCGGCGC GGCCGCAGCA CGTGAGCCTG CAGGTCGGCA CGGTGATGTC GCTCGTGAAT
ACCGCGATCG GGCGGATTTT CGCGGCCGGC ATGTCCGACG ACGTGCTGGC CGGCCTCCTG
GCCGACGAGC CGGTGCGCCT CGCCGGCAGC GCGACGCAGG TCGACGATGC GTTCCGCGCG
CGGCTCGCGA CGATCCGCAC GGACGAACTC GATTTCGCGT TCGACGCGCC GGTGCCGGGG
ATCGGCACGA TCGCCGCGCC CGTGTTCGAT CACACCGGCA GCATCCGGCT CGTGATCGCG
ATCATCGGCT CGTCACGCGG CTTCCCGCGC GGGCCGGACA GCGCGCTCGC ACATACGCTG
CTCGCCGCGA CGCGCCGCCT GTCGTGGCGA TTCGGGTGGA TCGGCGAGTA A
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| Protein sequence | MRVNLRAGAS SGVGYHAGFR QRKIHRVQNH EVSADDAQPK AQRGIQSVEV GGRLLDALAR
RRKPLGLSEL AAAAGLSTAQ AHTYLVSLTR LALVKRDALT GNYEPGPLSL RLGLMSIERQ
PAYRAALPHA ARLAEAVGLS VALSVPGVLG PTIVRIEHGG YPLHVNLHVG SVMSLDTTAT
GRVFRAFGDP ALLDTMAASQ AGAGDTLAGA EGEQPTSDAG AWQAELDAIR ARGIERGVDR
PSPGVSAMCV PVLDADGRLQ LALTVIGSTG SIDVGWDGPI ANALRDAARQ ATASLDAGRD
AQPSAPAAAA SVQRLPPALA DDTKAQRGIN ALDSTGDLLL ALVSAGRALP LRDLAAAAGM
PAAKAFPHLV SLQKIGLLSR DDAGCFGGGP LGQALGLIAM QRVSPTRDAE AEIVALAAAT
DMSVAAATLG PLGPTVIRLE ESARPQHVSL QVGTVMSLVN TAIGRIFAAG MSDDVLAGLL
ADEPVRLAGS ATQVDDAFRA RLATIRTDEL DFAFDAPVPG IGTIAAPVFD HTGSIRLVIA
IIGSSRGFPR GPDSALAHTL LAATRRLSWR FGWIGE
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