Gene BamMC406_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4195 
Symbol 
ID6179559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1246872 
End bp1247354 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content62% 
IMG OID641683964 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001810875 
Protein GI172063224 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.203034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.136531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACCC GCGAACGCAC GCCGAAAACC CTCGACAACC AGGACCGCAA GATCCTCGGT 
GCACTGCAAA AAAATGCGCG TCTGTCGAAC GCTGAACTGG CCGAACAGAT CGGCATGTCG
ACCACCGCGT GCTGGAACCG CACGCGGCAG CTCGAACTCG ACGGCTACAT CGACGGTTAC
GTCGCGCTGG TCAACCAGCG CATGCTCGGC TATGCGGACA TCGTGATCCT CGAAGTCACG
CTCGATCGCC ACGAAGACGA CGCGCTCGCG CGTTTCGGCG CCGAACTCGC GGCGCTGCCC
GAAGTGCTCG AGGCCTACCT GGTGTCGGGC GAATACGACT ACTGGATCAA GGTCGCGGTG
GACGGAACGG CCGGCTACGA GCGCTTCCTG CGTGAGAAGC TGTACCGGAT TTCGAGCATT
CGCCACAGCC GCTCGATGTT CGCGCTGAGG TGCATGAAGG ACGTGCCGTC GATTCAGGTG
TGA
 
Protein sequence
MATRERTPKT LDNQDRKILG ALQKNARLSN AELAEQIGMS TTACWNRTRQ LELDGYIDGY 
VALVNQRMLG YADIVILEVT LDRHEDDALA RFGAELAALP EVLEAYLVSG EYDYWIKVAV
DGTAGYERFL REKLYRISSI RHSRSMFALR CMKDVPSIQV