| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4188 |
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| Symbol | |
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| ID | 6179461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1235964 |
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| End bp | 1237196 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683957 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001810868 |
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| Protein GI | 172063217 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0941549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.890181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA AACATCACAG CTCCGTCGGC ATCCAGGTGG ACGAACACGG CATGCACCTG
CCGACGCGCA CGTCGGTGTC GCGGCGCGCG CGGGTCGTGC TGATCGTGAT CGGCGTGCTG
CTGGCCGCGG GCGCCGCACG CACGATCGTG GTCAACGTGT TGAACCGCGG CCGGCTCGAC
GCGGTGGCCG AGCAGAACAC GCGCCAGTAC GTGAGCATCG TGCATCCGGG CGATGCGGCC
AGCAGCGGCA AGCTGACGCT GCCCGGCACG CTGCGCGGCT TCGTCGAGGC GCCGATCTAT
GCGCGTGCGA GCGGCTACGT GCTGCGCTGG CAGGCCGACA TCGGCGCGCA CGTGAAGCAG
GGCCAGGTGC TTGCCGAGCT CGACACGCCC GAGCTGAACC AGGAGCTCGC GCAGGCCACG
GCGCAGCGCC AGCAGGCGCA GGCCGCGCTC GCGCTCGCGA AGACGTCGTT CGATCGCGCG
CAGCAGCTGC GCCAGCGCGA TGCGGTGTCG CAGCAGGAGC TCGACGACCG CCAGGGCGCG
TTCAACCAGG GCACCGCGAA CCTCGCGGCG GCCGATGCGA ACATGCGCCG GCTCACCGAA
CTGAAGGGCT TCCAGCGCAT CGTCGCGCCG ATCGACGGGG TCGTCACGCA GCGCAACGTC
GACGTCGGCG ACCTCGTCAA TTCCGGCAAC GCGGGCCGCT CGCTGTTCAC GGTCGTGCAG
GCCGACCGGC TGCGCCTGTA CGTGCAGGTG CCGCAGGCCT ACGCGCAGCA GGTGAAGGTC
GGCCAGCACG TGGGCGTCGC GCAGGCCGAA CTGCCCGGCA AGACCTTCGA CGGCACGGTC
ACGCGCACGT CCCAGGCGAT CGATGTCGCG ACGCGTTCGC TGCAGATCGA GATCACGCTG
CCGAACCCGG ACGGCCGGCT GCTGCCCGGC GCGTACGTGC AGGCGACGCT GCCGATGACG
CCGGTCGGCC GCCTGCAGAT ACCGGCCAAT ACGCTGCTGT TCCGTGCCGA GGGGCCGACG
GTCGCGACCG TCGACGCGAA CGGCCAGGTG CGCCTGAAGG CGGTGACGGT CGTGCGCACG
ATCGGGCAGA CGCTCGAAGT CGACGGCCCG CTCACGCCGA GCGACCGCCT CGTCGCGAAC
CCGAGCGACG CGCTCGCGAA CGGCGACCCG GTCGTCGTGC AGGCGCCGCC CGCCGCGAAG
CCGGCCTCCG CGGCCGCGGG AGCGAAGTCG TGA
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| Protein sequence | MEEKHHSSVG IQVDEHGMHL PTRTSVSRRA RVVLIVIGVL LAAGAARTIV VNVLNRGRLD
AVAEQNTRQY VSIVHPGDAA SSGKLTLPGT LRGFVEAPIY ARASGYVLRW QADIGAHVKQ
GQVLAELDTP ELNQELAQAT AQRQQAQAAL ALAKTSFDRA QQLRQRDAVS QQELDDRQGA
FNQGTANLAA ADANMRRLTE LKGFQRIVAP IDGVVTQRNV DVGDLVNSGN AGRSLFTVVQ
ADRLRLYVQV PQAYAQQVKV GQHVGVAQAE LPGKTFDGTV TRTSQAIDVA TRSLQIEITL
PNPDGRLLPG AYVQATLPMT PVGRLQIPAN TLLFRAEGPT VATVDANGQV RLKAVTVVRT
IGQTLEVDGP LTPSDRLVAN PSDALANGDP VVVQAPPAAK PASAAAGAKS
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