Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4182 |
Symbol | |
ID | 6179316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1229693 |
End bp | 1230487 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683951 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001810862 |
Protein GI | 172063211 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.461844 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCG ATCTGACAGG CAAGACCGCG GTCGTTACCG CTTCCACCGC CGGCATCGGG CTGGCGATCG CAGAAGGGCT CGCGCATGCG GGCGCACGTG TCGTCGTCAA CGGACGCAGC GACGGGTCGG TCGACGCCGC GCTCGCGCTG TTGCGCACCG CGGTGCCCGA CGCGGACATC GACGGCGTCG CCGCCGACCT GTCCGACGCC ACCGGCGTCG CGCGCATCAC GCAGCACACG CCGCAGGCCG ACATCCTCGT CAACAACGCT GGCATCTACG GGCTGAAGGG TTTCTTCGAC ATCGACGATG ACGAATGGGC CCACTACTTC CAGATGAACG TGATGTCCGG CGTGCGTCTC GCACGGCACT ATCTGAAAGG CATGCTCGAG CGCAACGCGG GCCGCATCGT GTTCATTTCG TCGGAATCGG GCCTGAACAT CCCGGTCGAC ATGATTCACT ACGGGTTCAC GAAGACCGCC CAGCTGGCGA TCGCGCGCGG CCTCGCGAAG GTCGCGGCCG GTACCAGCGT GACCGTCAAT TCGGTGCTGC CGGGGCCGAC AATGTCGGAA GGTGTGCGTG CGATGCTGAA AGCGACGGCC GACGAAACGG GCCGCAGCAT CGACGAAGTC GCGGTGGATT TCGTGCGCAG CCAGCGCGCG AGTTCGATCA TTCAGCGGCC GGCGACGACG GAGGAAGTTG CGAATCTCGT CGTGTACGTA TGCTCGCCGC AGGCCTCGGC GACGACGGGC GCGGCGTTGC GCGTCGATGG CGGCGTGGTC GATACGATTG CTTGA
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Protein sequence | MHIDLTGKTA VVTASTAGIG LAIAEGLAHA GARVVVNGRS DGSVDAALAL LRTAVPDADI DGVAADLSDA TGVARITQHT PQADILVNNA GIYGLKGFFD IDDDEWAHYF QMNVMSGVRL ARHYLKGMLE RNAGRIVFIS SESGLNIPVD MIHYGFTKTA QLAIARGLAK VAAGTSVTVN SVLPGPTMSE GVRAMLKATA DETGRSIDEV AVDFVRSQRA SSIIQRPATT EEVANLVVYV CSPQASATTG AALRVDGGVV DTIA
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